Gene : Solyc01g005920.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR11785//PTHR11785:SF378 - AMINO ACID TRANSPORTER // SUBFAMILY NOT NAMED Description:  Amino acid permease (Fragment) (AHRD V1 ***- B8C3S3_THAPS); contains Interpro domain(s) IPR002293 Amino acid/polyamine transporter I
Genomic Order:  93 Name:  ? Solyc01g005920.2
Secondary Identifier:  ? PAC:36139580
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g005920.2 0.5kb upstream 0.5kb upstream 2219 true SL2.50ch01: 600898-603116 Solanum lycopersicum
Solyc01g005920.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 602617-603116 Solanum lycopersicum
Solyc01g005920.2 0.5kb downstream 0.5kb downstream 2219 true SL2.50ch01: 600398-602616 Solanum lycopersicum
Solyc01g005920.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 600398-600897 Solanum lycopersicum
Solyc01g005920.2 1.0kb upstream 1.0kb upstream 2719 true SL2.50ch01: 600898-603616 Solanum lycopersicum
Solyc01g005920.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 602617-603616 Solanum lycopersicum
Solyc01g005920.2 1.0kb downstream 1.0kb downstream 2719 true SL2.50ch01: 599898-602616 Solanum lycopersicum
Solyc01g005920.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 599898-600897 Solanum lycopersicum
Solyc01g005920.2 2.0kb upstream 2.0kb upstream 3719 true SL2.50ch01: 600898-604616 Solanum lycopersicum
Solyc01g005920.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 602617-604616 Solanum lycopersicum
Solyc01g005920.2 2.0kb downstream 2.0kb downstream 3719 true SL2.50ch01: 598898-602616 Solanum lycopersicum
Solyc01g005920.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 598898-600897 Solanum lycopersicum
Solyc01g005920.2 5.0kb upstream 5.0kb upstream 6719 true SL2.50ch01: 600898-607616 Solanum lycopersicum
Solyc01g005920.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 602617-607616 Solanum lycopersicum
Solyc01g005920.2 5.0kb downstream 5.0kb downstream 6719 true SL2.50ch01: 595898-602616 Solanum lycopersicum
Solyc01g005920.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 595898-600897 Solanum lycopersicum
Solyc01g005920.2 10.0kb upstream 10.0kb upstream 11719 true SL2.50ch01: 600898-612616 Solanum lycopersicum
Solyc01g005920.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 602617-612616 Solanum lycopersicum
Solyc01g005920.2 10.0kb downstream 10.0kb downstream 11719 true SL2.50ch01: 590898-602616 Solanum lycopersicum
Solyc01g005920.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 590898-600897 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471413 5263 Asterids View MSA
123751065 5271 Pentapetalae View MSA
122791339 5272 Eudicot View MSA
122044006 5273 Angiosperm View MSA
121310225 5274 Embryophyte View MSA
123347773 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain