Gene : Solyc01g007220.2 S. lycopersicum ITAG2.4
Defline:  (1 of 3) PTHR31415:SF2 - LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN-RELATED Description:  NHL1 (Fragment) (AHRD V1 **-- B0LZM3_ARATH); contains Interpro domain(s) IPR010847 Harpin-induced 1
Genomic Order:  223 Name:  ? Solyc01g007220.2
Secondary Identifier:  ? PAC:36138977
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g007220.2 0.5kb upstream 0.5kb upstream 1566 true SL2.50ch01: 1800421-1801986 Solanum lycopersicum
Solyc01g007220.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 1800421-1800920 Solanum lycopersicum
Solyc01g007220.2 0.5kb downstream 0.5kb downstream 1566 true SL2.50ch01: 1800921-1802486 Solanum lycopersicum
Solyc01g007220.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 1801987-1802486 Solanum lycopersicum
Solyc01g007220.2 1.0kb upstream 1.0kb upstream 2066 true SL2.50ch01: 1799921-1801986 Solanum lycopersicum
Solyc01g007220.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 1799921-1800920 Solanum lycopersicum
Solyc01g007220.2 1.0kb downstream 1.0kb downstream 2066 true SL2.50ch01: 1800921-1802986 Solanum lycopersicum
Solyc01g007220.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 1801987-1802986 Solanum lycopersicum
Solyc01g007220.2 2.0kb upstream 2.0kb upstream 3066 true SL2.50ch01: 1798921-1801986 Solanum lycopersicum
Solyc01g007220.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 1798921-1800920 Solanum lycopersicum
Solyc01g007220.2 2.0kb downstream 2.0kb downstream 3066 true SL2.50ch01: 1800921-1803986 Solanum lycopersicum
Solyc01g007220.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 1801987-1803986 Solanum lycopersicum
Solyc01g007220.2 5.0kb upstream 5.0kb upstream 6066 true SL2.50ch01: 1795921-1801986 Solanum lycopersicum
Solyc01g007220.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 1795921-1800920 Solanum lycopersicum
Solyc01g007220.2 5.0kb downstream 5.0kb downstream 6066 true SL2.50ch01: 1800921-1806986 Solanum lycopersicum
Solyc01g007220.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 1801987-1806986 Solanum lycopersicum
Solyc01g007220.2 10.0kb upstream 10.0kb upstream 11066 true SL2.50ch01: 1790921-1801986 Solanum lycopersicum
Solyc01g007220.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 1790921-1800920 Solanum lycopersicum
Solyc01g007220.2 10.0kb downstream 10.0kb downstream 11066 true SL2.50ch01: 1800921-1811986 Solanum lycopersicum
Solyc01g007220.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 1801987-1811986 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473794 5263 Asterids View MSA
123748303 5271 Pentapetalae View MSA
122796873 5272 Eudicot View MSA
122050146 5273 Angiosperm View MSA
121351108 5274 Embryophyte View MSA
123382008 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain