Gene : Solyc01g087170.2 S. lycopersicum ITAG2.4
Defline:  (1 of 5) PTHR14493:SF47 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 Description:  Zinc finger CCCH domain-containing protein 30 (AHRD V1 ***- C3H30_ARATH); contains Interpro domain(s) IPR002110 Ankyrin
Genomic Order:  2172 Name:  ? Solyc01g087170.2
Secondary Identifier:  ? PAC:36137720
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g087170.2 0.5kb upstream 0.5kb upstream 1922 true SL2.50ch01: 82103228-82105149 Solanum lycopersicum
Solyc01g087170.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 82104650-82105149 Solanum lycopersicum
Solyc01g087170.2 0.5kb downstream 0.5kb downstream 1922 true SL2.50ch01: 82102728-82104649 Solanum lycopersicum
Solyc01g087170.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 82102728-82103227 Solanum lycopersicum
Solyc01g087170.2 1.0kb upstream 1.0kb upstream 2422 true SL2.50ch01: 82103228-82105649 Solanum lycopersicum
Solyc01g087170.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 82104650-82105649 Solanum lycopersicum
Solyc01g087170.2 1.0kb downstream 1.0kb downstream 2422 true SL2.50ch01: 82102228-82104649 Solanum lycopersicum
Solyc01g087170.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 82102228-82103227 Solanum lycopersicum
Solyc01g087170.2 2.0kb upstream 2.0kb upstream 3422 true SL2.50ch01: 82103228-82106649 Solanum lycopersicum
Solyc01g087170.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 82104650-82106649 Solanum lycopersicum
Solyc01g087170.2 2.0kb downstream 2.0kb downstream 3422 true SL2.50ch01: 82101228-82104649 Solanum lycopersicum
Solyc01g087170.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 82101228-82103227 Solanum lycopersicum
Solyc01g087170.2 5.0kb upstream 5.0kb upstream 6422 true SL2.50ch01: 82103228-82109649 Solanum lycopersicum
Solyc01g087170.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 82104650-82109649 Solanum lycopersicum
Solyc01g087170.2 5.0kb downstream 5.0kb downstream 6422 true SL2.50ch01: 82098228-82104649 Solanum lycopersicum
Solyc01g087170.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 82098228-82103227 Solanum lycopersicum
Solyc01g087170.2 10.0kb upstream 10.0kb upstream 11422 true SL2.50ch01: 82103228-82114649 Solanum lycopersicum
Solyc01g087170.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 82104650-82114649 Solanum lycopersicum
Solyc01g087170.2 10.0kb downstream 10.0kb downstream 11422 true SL2.50ch01: 82093228-82104649 Solanum lycopersicum
Solyc01g087170.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 82093228-82103227 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121482654 5263 Asterids View MSA
123753423 5271 Pentapetalae View MSA
122793628 5272 Eudicot View MSA
122049418 5273 Angiosperm View MSA
123429052 5275 Viridiplantae View MSA
121351105 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain