Gene : Solyc01g100840.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR23249:SF15 - TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 4 Description:  Trafficking protein particle complex subunit 4 (AHRD V1 ***- B6U8Z1_MAIZE); contains Interpro domain(s) IPR007233 Sybindin-like protein
Genomic Order:  3236 Name:  ? Solyc01g100840.2
Secondary Identifier:  ? PAC:36137841
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g100840.2 0.5kb upstream 0.5kb upstream 5535 true SL2.50ch01: 90753605-90759139 Solanum lycopersicum
Solyc01g100840.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 90758640-90759139 Solanum lycopersicum
Solyc01g100840.2 0.5kb downstream 0.5kb downstream 5535 true SL2.50ch01: 90753105-90758639 Solanum lycopersicum
Solyc01g100840.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 90753105-90753604 Solanum lycopersicum
Solyc01g100840.2 1.0kb upstream 1.0kb upstream 6035 true SL2.50ch01: 90753605-90759639 Solanum lycopersicum
Solyc01g100840.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 90758640-90759639 Solanum lycopersicum
Solyc01g100840.2 1.0kb downstream 1.0kb downstream 6035 true SL2.50ch01: 90752605-90758639 Solanum lycopersicum
Solyc01g100840.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 90752605-90753604 Solanum lycopersicum
Solyc01g100840.2 2.0kb upstream 2.0kb upstream 7035 true SL2.50ch01: 90753605-90760639 Solanum lycopersicum
Solyc01g100840.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 90758640-90760639 Solanum lycopersicum
Solyc01g100840.2 2.0kb downstream 2.0kb downstream 7035 true SL2.50ch01: 90751605-90758639 Solanum lycopersicum
Solyc01g100840.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 90751605-90753604 Solanum lycopersicum
Solyc01g100840.2 5.0kb upstream 5.0kb upstream 10035 true SL2.50ch01: 90753605-90763639 Solanum lycopersicum
Solyc01g100840.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 90758640-90763639 Solanum lycopersicum
Solyc01g100840.2 5.0kb downstream 5.0kb downstream 10035 true SL2.50ch01: 90748605-90758639 Solanum lycopersicum
Solyc01g100840.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 90748605-90753604 Solanum lycopersicum
Solyc01g100840.2 10.0kb upstream 10.0kb upstream 15035 true SL2.50ch01: 90753605-90768639 Solanum lycopersicum
Solyc01g100840.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 90758640-90768639 Solanum lycopersicum
Solyc01g100840.2 10.0kb downstream 10.0kb downstream 15035 true SL2.50ch01: 90743605-90758639 Solanum lycopersicum
Solyc01g100840.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 90743605-90753604 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475266 5263 Asterids View MSA
123740967 5271 Pentapetalae View MSA
122786625 5272 Eudicot View MSA
122043161 5273 Angiosperm View MSA
121347078 5274 Embryophyte View MSA
123424121 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain