Gene : Solyc01g079330.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K12835 - ATP-dependent RNA helicase DDX42 (DDX42, SF3B125) Description:  ATP dependent RNA helicase (AHRD V1 *-*- B3LNW9_YEAS1); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Genomic Order:  1848 Name:  ? Solyc01g079330.2
Secondary Identifier:  ? PAC:36138945
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g079330.2 0.5kb upstream 0.5kb upstream 9825 true SL2.50ch01: 78398525-78408349 Solanum lycopersicum
Solyc01g079330.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 78407850-78408349 Solanum lycopersicum
Solyc01g079330.2 0.5kb downstream 0.5kb downstream 9825 true SL2.50ch01: 78398025-78407849 Solanum lycopersicum
Solyc01g079330.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 78398025-78398524 Solanum lycopersicum
Solyc01g079330.2 1.0kb upstream 1.0kb upstream 10325 true SL2.50ch01: 78398525-78408849 Solanum lycopersicum
Solyc01g079330.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 78407850-78408849 Solanum lycopersicum
Solyc01g079330.2 1.0kb downstream 1.0kb downstream 10325 true SL2.50ch01: 78397525-78407849 Solanum lycopersicum
Solyc01g079330.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 78397525-78398524 Solanum lycopersicum
Solyc01g079330.2 2.0kb upstream 2.0kb upstream 11325 true SL2.50ch01: 78398525-78409849 Solanum lycopersicum
Solyc01g079330.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 78407850-78409849 Solanum lycopersicum
Solyc01g079330.2 2.0kb downstream 2.0kb downstream 11325 true SL2.50ch01: 78396525-78407849 Solanum lycopersicum
Solyc01g079330.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 78396525-78398524 Solanum lycopersicum
Solyc01g079330.2 5.0kb upstream 5.0kb upstream 14325 true SL2.50ch01: 78398525-78412849 Solanum lycopersicum
Solyc01g079330.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 78407850-78412849 Solanum lycopersicum
Solyc01g079330.2 5.0kb downstream 5.0kb downstream 14325 true SL2.50ch01: 78393525-78407849 Solanum lycopersicum
Solyc01g079330.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 78393525-78398524 Solanum lycopersicum
Solyc01g079330.2 10.0kb upstream 10.0kb upstream 19325 true SL2.50ch01: 78398525-78417849 Solanum lycopersicum
Solyc01g079330.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 78407850-78417849 Solanum lycopersicum
Solyc01g079330.2 10.0kb downstream 10.0kb downstream 19325 true SL2.50ch01: 78388525-78407849 Solanum lycopersicum
Solyc01g079330.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 78388525-78398524 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475001 5263 Asterids View MSA
123739666 5271 Pentapetalae View MSA
122787130 5272 Eudicot View MSA
122042698 5273 Angiosperm View MSA
123429150 5275 Viridiplantae View MSA
121344325 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain