Gene : Solyc01g068150.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR13495 - NEFA-INTERACTING NUCLEAR PROTEIN NIP30 Description:  Chromosome 11 contig 1 DNA sequence (AHRD V1 *-*- Q00YQ7_OSTTA); contains Interpro domain(s) IPR019331 NEFA-interacting nuclear protein NIP30, N-terminal
Genomic Order:  1774 Name:  ? Solyc01g068150.2
Secondary Identifier:  ? PAC:36138334
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g068150.2 0.5kb upstream 0.5kb upstream 6508 true SL2.50ch01: 77252156-77258663 Solanum lycopersicum
Solyc01g068150.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 77258164-77258663 Solanum lycopersicum
Solyc01g068150.2 0.5kb downstream 0.5kb downstream 6508 true SL2.50ch01: 77251656-77258163 Solanum lycopersicum
Solyc01g068150.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 77251656-77252155 Solanum lycopersicum
Solyc01g068150.2 1.0kb upstream 1.0kb upstream 7008 true SL2.50ch01: 77252156-77259163 Solanum lycopersicum
Solyc01g068150.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 77258164-77259163 Solanum lycopersicum
Solyc01g068150.2 1.0kb downstream 1.0kb downstream 7008 true SL2.50ch01: 77251156-77258163 Solanum lycopersicum
Solyc01g068150.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 77251156-77252155 Solanum lycopersicum
Solyc01g068150.2 2.0kb upstream 2.0kb upstream 8008 true SL2.50ch01: 77252156-77260163 Solanum lycopersicum
Solyc01g068150.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 77258164-77260163 Solanum lycopersicum
Solyc01g068150.2 2.0kb downstream 2.0kb downstream 8008 true SL2.50ch01: 77250156-77258163 Solanum lycopersicum
Solyc01g068150.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 77250156-77252155 Solanum lycopersicum
Solyc01g068150.2 5.0kb upstream 5.0kb upstream 11008 true SL2.50ch01: 77252156-77263163 Solanum lycopersicum
Solyc01g068150.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 77258164-77263163 Solanum lycopersicum
Solyc01g068150.2 5.0kb downstream 5.0kb downstream 11008 true SL2.50ch01: 77247156-77258163 Solanum lycopersicum
Solyc01g068150.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 77247156-77252155 Solanum lycopersicum
Solyc01g068150.2 10.0kb upstream 10.0kb upstream 16008 true SL2.50ch01: 77252156-77268163 Solanum lycopersicum
Solyc01g068150.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 77258164-77268163 Solanum lycopersicum
Solyc01g068150.2 10.0kb downstream 10.0kb downstream 16008 true SL2.50ch01: 77242156-77258163 Solanum lycopersicum
Solyc01g068150.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 77242156-77252155 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468369 5263 Asterids View MSA
123737480 5271 Pentapetalae View MSA
122787094 5272 Eudicot View MSA
122047119 5273 Angiosperm View MSA
121346332 5274 Embryophyte View MSA
123425229 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain