Gene : Solyc01g080250.2 S. lycopersicum ITAG2.4
Defline:  (1 of 10) K10523 - speckle-type POZ protein (SPOP) Description:  BTB/POZ domain containing protein expressed (AHRD V1 ***- Q10C73_ORYSJ); contains Interpro domain(s) IPR013089 Kelch related
Genomic Order:  1940 Name:  ? Solyc01g080250.2
Secondary Identifier:  ? PAC:36138510
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g080250.2 0.5kb upstream 0.5kb upstream 9541 true SL2.50ch01: 79472260-79481800 Solanum lycopersicum
Solyc01g080250.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 79481301-79481800 Solanum lycopersicum
Solyc01g080250.2 0.5kb downstream 0.5kb downstream 9541 true SL2.50ch01: 79471760-79481300 Solanum lycopersicum
Solyc01g080250.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 79471760-79472259 Solanum lycopersicum
Solyc01g080250.2 1.0kb upstream 1.0kb upstream 10041 true SL2.50ch01: 79472260-79482300 Solanum lycopersicum
Solyc01g080250.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 79481301-79482300 Solanum lycopersicum
Solyc01g080250.2 1.0kb downstream 1.0kb downstream 10041 true SL2.50ch01: 79471260-79481300 Solanum lycopersicum
Solyc01g080250.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 79471260-79472259 Solanum lycopersicum
Solyc01g080250.2 2.0kb upstream 2.0kb upstream 11041 true SL2.50ch01: 79472260-79483300 Solanum lycopersicum
Solyc01g080250.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 79481301-79483300 Solanum lycopersicum
Solyc01g080250.2 2.0kb downstream 2.0kb downstream 11041 true SL2.50ch01: 79470260-79481300 Solanum lycopersicum
Solyc01g080250.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 79470260-79472259 Solanum lycopersicum
Solyc01g080250.2 5.0kb upstream 5.0kb upstream 14041 true SL2.50ch01: 79472260-79486300 Solanum lycopersicum
Solyc01g080250.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 79481301-79486300 Solanum lycopersicum
Solyc01g080250.2 5.0kb downstream 5.0kb downstream 14041 true SL2.50ch01: 79467260-79481300 Solanum lycopersicum
Solyc01g080250.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 79467260-79472259 Solanum lycopersicum
Solyc01g080250.2 10.0kb upstream 10.0kb upstream 19041 true SL2.50ch01: 79472260-79491300 Solanum lycopersicum
Solyc01g080250.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 79481301-79491300 Solanum lycopersicum
Solyc01g080250.2 10.0kb downstream 10.0kb downstream 19041 true SL2.50ch01: 79462260-79481300 Solanum lycopersicum
Solyc01g080250.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 79462260-79472259 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040960 5273 Angiosperm View MSA
121477641 5263 Asterids View MSA
123743633 5271 Pentapetalae View MSA
122791318 5272 Eudicot View MSA
121348457 5274 Embryophyte View MSA
123428082 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain