Gene : Solyc01g101240.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR13683//PTHR13683:SF312 - ASPARTYL PROTEASES // SUBFAMILY NOT NAMED Description:  Aspartic proteinase (AHRD V1 **** ASPRX_ORYSJ); contains Interpro domain(s) IPR001461 Peptidase A1
Genomic Order:  3275 Name:  ? Solyc01g101240.2
Secondary Identifier:  ? PAC:36138994
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g101240.2 0.5kb upstream 0.5kb upstream 5659 true SL2.50ch01: 91057555-91063213 Solanum lycopersicum
Solyc01g101240.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 91057555-91058054 Solanum lycopersicum
Solyc01g101240.2 0.5kb downstream 0.5kb downstream 5659 true SL2.50ch01: 91058055-91063713 Solanum lycopersicum
Solyc01g101240.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 91063214-91063713 Solanum lycopersicum
Solyc01g101240.2 1.0kb upstream 1.0kb upstream 6159 true SL2.50ch01: 91057055-91063213 Solanum lycopersicum
Solyc01g101240.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 91057055-91058054 Solanum lycopersicum
Solyc01g101240.2 1.0kb downstream 1.0kb downstream 6159 true SL2.50ch01: 91058055-91064213 Solanum lycopersicum
Solyc01g101240.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 91063214-91064213 Solanum lycopersicum
Solyc01g101240.2 2.0kb upstream 2.0kb upstream 7159 true SL2.50ch01: 91056055-91063213 Solanum lycopersicum
Solyc01g101240.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 91056055-91058054 Solanum lycopersicum
Solyc01g101240.2 2.0kb downstream 2.0kb downstream 7159 true SL2.50ch01: 91058055-91065213 Solanum lycopersicum
Solyc01g101240.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 91063214-91065213 Solanum lycopersicum
Solyc01g101240.2 5.0kb upstream 5.0kb upstream 10159 true SL2.50ch01: 91053055-91063213 Solanum lycopersicum
Solyc01g101240.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 91053055-91058054 Solanum lycopersicum
Solyc01g101240.2 5.0kb downstream 5.0kb downstream 10159 true SL2.50ch01: 91058055-91068213 Solanum lycopersicum
Solyc01g101240.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 91063214-91068213 Solanum lycopersicum
Solyc01g101240.2 10.0kb upstream 10.0kb upstream 15159 true SL2.50ch01: 91048055-91063213 Solanum lycopersicum
Solyc01g101240.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 91048055-91058054 Solanum lycopersicum
Solyc01g101240.2 10.0kb downstream 10.0kb downstream 15159 true SL2.50ch01: 91058055-91073213 Solanum lycopersicum
Solyc01g101240.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 91063214-91073213 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474027 5263 Asterids View MSA
123740338 5271 Pentapetalae View MSA
122795387 5272 Eudicot View MSA
122051849 5273 Angiosperm View MSA
121312739 5274 Embryophyte View MSA
123428778 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain