Gene : Solyc01g080660.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR23147//PTHR23147:SF7 - SERINE/ARGININE RICH SPLICING FACTOR // SUBFAMILY NOT NAMED Description:  Splicing factor arginine/serine-rich 4 (AHRD V1 *--- B6THS7_MAIZE); contains Interpro domain(s) IPR012677 Nucleotide-binding, alpha-beta plait
Genomic Order:  1981 Name:  ? Solyc01g080660.2
Secondary Identifier:  ? PAC:36139420
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g080660.2 0.5kb upstream 0.5kb upstream 4840 true SL2.50ch01: 79898102-79902941 Solanum lycopersicum
Solyc01g080660.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 79902442-79902941 Solanum lycopersicum
Solyc01g080660.2 0.5kb downstream 0.5kb downstream 4840 true SL2.50ch01: 79897602-79902441 Solanum lycopersicum
Solyc01g080660.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 79897602-79898101 Solanum lycopersicum
Solyc01g080660.2 1.0kb upstream 1.0kb upstream 5340 true SL2.50ch01: 79898102-79903441 Solanum lycopersicum
Solyc01g080660.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 79902442-79903441 Solanum lycopersicum
Solyc01g080660.2 1.0kb downstream 1.0kb downstream 5340 true SL2.50ch01: 79897102-79902441 Solanum lycopersicum
Solyc01g080660.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 79897102-79898101 Solanum lycopersicum
Solyc01g080660.2 2.0kb upstream 2.0kb upstream 6340 true SL2.50ch01: 79898102-79904441 Solanum lycopersicum
Solyc01g080660.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 79902442-79904441 Solanum lycopersicum
Solyc01g080660.2 2.0kb downstream 2.0kb downstream 6340 true SL2.50ch01: 79896102-79902441 Solanum lycopersicum
Solyc01g080660.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 79896102-79898101 Solanum lycopersicum
Solyc01g080660.2 5.0kb upstream 5.0kb upstream 9340 true SL2.50ch01: 79898102-79907441 Solanum lycopersicum
Solyc01g080660.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 79902442-79907441 Solanum lycopersicum
Solyc01g080660.2 5.0kb downstream 5.0kb downstream 9340 true SL2.50ch01: 79893102-79902441 Solanum lycopersicum
Solyc01g080660.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 79893102-79898101 Solanum lycopersicum
Solyc01g080660.2 10.0kb upstream 10.0kb upstream 14340 true SL2.50ch01: 79898102-79912441 Solanum lycopersicum
Solyc01g080660.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 79902442-79912441 Solanum lycopersicum
Solyc01g080660.2 10.0kb downstream 10.0kb downstream 14340 true SL2.50ch01: 79888102-79902441 Solanum lycopersicum
Solyc01g080660.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 79888102-79898101 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121414697 5263 Asterids View MSA
123745192 5271 Pentapetalae View MSA
122795614 5272 Eudicot View MSA
122047490 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349478 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain