Gene : Solyc01g080480.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR14859 - CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR Description:  Endonuclease/exonuclease/phosphatase family protein (AHRD V1 ***- D7L0T9_ARALY); contains Interpro domain(s) IPR005135 Endonuclease/exonuclease/phosphatase
Genomic Order:  1963 Name:  ? Solyc01g080480.2
Secondary Identifier:  ? PAC:36137587
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g080480.2 0.5kb upstream 0.5kb upstream 2598 true SL2.50ch01: 79711802-79714399 Solanum lycopersicum
Solyc01g080480.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 79711802-79712301 Solanum lycopersicum
Solyc01g080480.2 0.5kb downstream 0.5kb downstream 2598 true SL2.50ch01: 79712302-79714899 Solanum lycopersicum
Solyc01g080480.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 79714400-79714899 Solanum lycopersicum
Solyc01g080480.2 1.0kb upstream 1.0kb upstream 3098 true SL2.50ch01: 79711302-79714399 Solanum lycopersicum
Solyc01g080480.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 79711302-79712301 Solanum lycopersicum
Solyc01g080480.2 1.0kb downstream 1.0kb downstream 3098 true SL2.50ch01: 79712302-79715399 Solanum lycopersicum
Solyc01g080480.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 79714400-79715399 Solanum lycopersicum
Solyc01g080480.2 2.0kb upstream 2.0kb upstream 4098 true SL2.50ch01: 79710302-79714399 Solanum lycopersicum
Solyc01g080480.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 79710302-79712301 Solanum lycopersicum
Solyc01g080480.2 2.0kb downstream 2.0kb downstream 4098 true SL2.50ch01: 79712302-79716399 Solanum lycopersicum
Solyc01g080480.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 79714400-79716399 Solanum lycopersicum
Solyc01g080480.2 5.0kb upstream 5.0kb upstream 7098 true SL2.50ch01: 79707302-79714399 Solanum lycopersicum
Solyc01g080480.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 79707302-79712301 Solanum lycopersicum
Solyc01g080480.2 5.0kb downstream 5.0kb downstream 7098 true SL2.50ch01: 79712302-79719399 Solanum lycopersicum
Solyc01g080480.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 79714400-79719399 Solanum lycopersicum
Solyc01g080480.2 10.0kb upstream 10.0kb upstream 12098 true SL2.50ch01: 79702302-79714399 Solanum lycopersicum
Solyc01g080480.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 79702302-79712301 Solanum lycopersicum
Solyc01g080480.2 10.0kb downstream 10.0kb downstream 12098 true SL2.50ch01: 79712302-79724399 Solanum lycopersicum
Solyc01g080480.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 79714400-79724399 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121414386 5263 Asterids View MSA
123743998 5271 Pentapetalae View MSA
122789343 5272 Eudicot View MSA
122044704 5273 Angiosperm View MSA
121310332 5274 Embryophyte View MSA
123347845 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain