Gene : Solyc01g101040.2 S. lycopersicum ITAG2.4
Defline:  (1 of 5) 2.3.3.8 - ATP citrate synthase / Citric cleavage enzyme Description:  ATP-citrate lyase A-3 (AHRD V1 **** D7KJQ3_ARALY); contains Interpro domain(s) IPR016102 Succinyl-CoA synthetase-like
Genomic Order:  3256 Name:  ? Solyc01g101040.2
Secondary Identifier:  ? PAC:36140643
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-5172 Solanum lycopersicum pathologic  
Slycopersicum PWY-5173 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g101040.2 0.5kb upstream 0.5kb upstream 5330 true SL2.50ch01: 90899202-90904531 Solanum lycopersicum
Solyc01g101040.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 90899202-90899701 Solanum lycopersicum
Solyc01g101040.2 0.5kb downstream 0.5kb downstream 5330 true SL2.50ch01: 90899702-90905031 Solanum lycopersicum
Solyc01g101040.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 90904532-90905031 Solanum lycopersicum
Solyc01g101040.2 1.0kb upstream 1.0kb upstream 5830 true SL2.50ch01: 90898702-90904531 Solanum lycopersicum
Solyc01g101040.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 90898702-90899701 Solanum lycopersicum
Solyc01g101040.2 1.0kb downstream 1.0kb downstream 5830 true SL2.50ch01: 90899702-90905531 Solanum lycopersicum
Solyc01g101040.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 90904532-90905531 Solanum lycopersicum
Solyc01g101040.2 2.0kb upstream 2.0kb upstream 6830 true SL2.50ch01: 90897702-90904531 Solanum lycopersicum
Solyc01g101040.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 90897702-90899701 Solanum lycopersicum
Solyc01g101040.2 2.0kb downstream 2.0kb downstream 6830 true SL2.50ch01: 90899702-90906531 Solanum lycopersicum
Solyc01g101040.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 90904532-90906531 Solanum lycopersicum
Solyc01g101040.2 5.0kb upstream 5.0kb upstream 9830 true SL2.50ch01: 90894702-90904531 Solanum lycopersicum
Solyc01g101040.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 90894702-90899701 Solanum lycopersicum
Solyc01g101040.2 5.0kb downstream 5.0kb downstream 9830 true SL2.50ch01: 90899702-90909531 Solanum lycopersicum
Solyc01g101040.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 90904532-90909531 Solanum lycopersicum
Solyc01g101040.2 10.0kb upstream 10.0kb upstream 14830 true SL2.50ch01: 90889702-90904531 Solanum lycopersicum
Solyc01g101040.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 90889702-90899701 Solanum lycopersicum
Solyc01g101040.2 10.0kb downstream 10.0kb downstream 14830 true SL2.50ch01: 90899702-90914531 Solanum lycopersicum
Solyc01g101040.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 90904532-90914531 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468617 5263 Asterids View MSA
123744939 5271 Pentapetalae View MSA
122786148 5272 Eudicot View MSA
122042565 5273 Angiosperm View MSA
121348583 5274 Embryophyte View MSA
123428169 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain