Gene : Solyc01g109540.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K17267 - coatomer protein complex, subunit gamma (COPG) Description:  Coatomer subunit gamma (AHRD V1 ***- B6SV32_MAIZE); contains Interpro domain(s) IPR017106 Coatomer, gamma subunit
Genomic Order:  4002 Name:  ? Solyc01g109540.2
Secondary Identifier:  ? PAC:36139147
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g109540.2 0.5kb upstream 0.5kb upstream 9244 true SL2.50ch01: 96459080-96468323 Solanum lycopersicum
Solyc01g109540.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 96459080-96459579 Solanum lycopersicum
Solyc01g109540.2 0.5kb downstream 0.5kb downstream 9244 true SL2.50ch01: 96459580-96468823 Solanum lycopersicum
Solyc01g109540.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 96468324-96468823 Solanum lycopersicum
Solyc01g109540.2 1.0kb upstream 1.0kb upstream 9744 true SL2.50ch01: 96458580-96468323 Solanum lycopersicum
Solyc01g109540.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 96458580-96459579 Solanum lycopersicum
Solyc01g109540.2 1.0kb downstream 1.0kb downstream 9744 true SL2.50ch01: 96459580-96469323 Solanum lycopersicum
Solyc01g109540.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 96468324-96469323 Solanum lycopersicum
Solyc01g109540.2 2.0kb upstream 2.0kb upstream 10744 true SL2.50ch01: 96457580-96468323 Solanum lycopersicum
Solyc01g109540.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 96457580-96459579 Solanum lycopersicum
Solyc01g109540.2 2.0kb downstream 2.0kb downstream 10744 true SL2.50ch01: 96459580-96470323 Solanum lycopersicum
Solyc01g109540.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 96468324-96470323 Solanum lycopersicum
Solyc01g109540.2 5.0kb upstream 5.0kb upstream 13744 true SL2.50ch01: 96454580-96468323 Solanum lycopersicum
Solyc01g109540.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 96454580-96459579 Solanum lycopersicum
Solyc01g109540.2 5.0kb downstream 5.0kb downstream 13744 true SL2.50ch01: 96459580-96473323 Solanum lycopersicum
Solyc01g109540.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 96468324-96473323 Solanum lycopersicum
Solyc01g109540.2 10.0kb upstream 10.0kb upstream 18744 true SL2.50ch01: 96449580-96468323 Solanum lycopersicum
Solyc01g109540.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 96449580-96459579 Solanum lycopersicum
Solyc01g109540.2 10.0kb downstream 10.0kb downstream 18744 true SL2.50ch01: 96459580-96478323 Solanum lycopersicum
Solyc01g109540.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 96468324-96478323 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467057 5263 Asterids View MSA
123745715 5271 Pentapetalae View MSA
122789783 5272 Eudicot View MSA
122043525 5273 Angiosperm View MSA
121350751 5274 Embryophyte View MSA
123428143 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain