Gene : Solyc10g054110.1 S. lycopersicum ITAG2.4
Defline:  (1 of 3) PTHR11206:SF116 - ENHANCED DISEASE SUSCEPTIBILITY 5-RELATED Description:  MATE efflux family protein (AHRD V1 **-- D7CWB4_TRURR); contains Interpro domain(s) IPR002528 Multi antimicrobial extrusion protein MatE
Genomic Order:  1435 Name:  ? Solyc10g054110.1
Secondary Identifier:  ? PAC:36154016
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g054110.1 0.5kb upstream 0.5kb upstream 5744 true SL2.50ch10: 54604528-54610271 Solanum lycopersicum
Solyc10g054110.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 54609772-54610271 Solanum lycopersicum
Solyc10g054110.1 0.5kb downstream 0.5kb downstream 5744 true SL2.50ch10: 54604028-54609771 Solanum lycopersicum
Solyc10g054110.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 54604028-54604527 Solanum lycopersicum
Solyc10g054110.1 1.0kb upstream 1.0kb upstream 6244 true SL2.50ch10: 54604528-54610771 Solanum lycopersicum
Solyc10g054110.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 54609772-54610771 Solanum lycopersicum
Solyc10g054110.1 1.0kb downstream 1.0kb downstream 6244 true SL2.50ch10: 54603528-54609771 Solanum lycopersicum
Solyc10g054110.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 54603528-54604527 Solanum lycopersicum
Solyc10g054110.1 2.0kb upstream 2.0kb upstream 7244 true SL2.50ch10: 54604528-54611771 Solanum lycopersicum
Solyc10g054110.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 54609772-54611771 Solanum lycopersicum
Solyc10g054110.1 2.0kb downstream 2.0kb downstream 7244 true SL2.50ch10: 54602528-54609771 Solanum lycopersicum
Solyc10g054110.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 54602528-54604527 Solanum lycopersicum
Solyc10g054110.1 5.0kb upstream 5.0kb upstream 10244 true SL2.50ch10: 54604528-54614771 Solanum lycopersicum
Solyc10g054110.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 54609772-54614771 Solanum lycopersicum
Solyc10g054110.1 5.0kb downstream 5.0kb downstream 10244 true SL2.50ch10: 54599528-54609771 Solanum lycopersicum
Solyc10g054110.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 54599528-54604527 Solanum lycopersicum
Solyc10g054110.1 10.0kb upstream 10.0kb upstream 15244 true SL2.50ch10: 54604528-54619771 Solanum lycopersicum
Solyc10g054110.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 54609772-54619771 Solanum lycopersicum
Solyc10g054110.1 10.0kb downstream 10.0kb downstream 15244 true SL2.50ch10: 54594528-54609771 Solanum lycopersicum
Solyc10g054110.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 54594528-54604527 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121389663 5263 Asterids View MSA
123745389 5271 Pentapetalae View MSA
122792728 5272 Eudicot View MSA
122050913 5273 Angiosperm View MSA
121350462 5274 Embryophyte View MSA
123428603 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain