Gene : Solyc10g012060.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR30566:SF5 - MECHANOSENSITIVE ION CHANNEL PROTEIN 1, MITOCHONDRIAL Description:  Small conductance mechanosensitive (MscS-family) ion channel (AHRD V1 *-*- Q31G33_THICR); contains Interpro domain(s) IPR006685 Mechanosensitive ion channel MscS
Genomic Order:  505 Name:  ? Solyc10g012060.2
Secondary Identifier:  ? PAC:36154710
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g012060.2 0.5kb upstream 0.5kb upstream 14510 true SL2.50ch10: 4386714-4401223 Solanum lycopersicum
Solyc10g012060.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 4386714-4387213 Solanum lycopersicum
Solyc10g012060.2 0.5kb downstream 0.5kb downstream 14510 true SL2.50ch10: 4387214-4401723 Solanum lycopersicum
Solyc10g012060.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 4401224-4401723 Solanum lycopersicum
Solyc10g012060.2 1.0kb upstream 1.0kb upstream 15010 true SL2.50ch10: 4386214-4401223 Solanum lycopersicum
Solyc10g012060.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 4386214-4387213 Solanum lycopersicum
Solyc10g012060.2 1.0kb downstream 1.0kb downstream 15010 true SL2.50ch10: 4387214-4402223 Solanum lycopersicum
Solyc10g012060.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 4401224-4402223 Solanum lycopersicum
Solyc10g012060.2 2.0kb upstream 2.0kb upstream 16010 true SL2.50ch10: 4385214-4401223 Solanum lycopersicum
Solyc10g012060.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 4385214-4387213 Solanum lycopersicum
Solyc10g012060.2 2.0kb downstream 2.0kb downstream 16010 true SL2.50ch10: 4387214-4403223 Solanum lycopersicum
Solyc10g012060.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 4401224-4403223 Solanum lycopersicum
Solyc10g012060.2 5.0kb upstream 5.0kb upstream 19010 true SL2.50ch10: 4382214-4401223 Solanum lycopersicum
Solyc10g012060.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 4382214-4387213 Solanum lycopersicum
Solyc10g012060.2 5.0kb downstream 5.0kb downstream 19010 true SL2.50ch10: 4387214-4406223 Solanum lycopersicum
Solyc10g012060.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 4401224-4406223 Solanum lycopersicum
Solyc10g012060.2 10.0kb upstream 10.0kb upstream 24010 true SL2.50ch10: 4377214-4401223 Solanum lycopersicum
Solyc10g012060.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 4377214-4387213 Solanum lycopersicum
Solyc10g012060.2 10.0kb downstream 10.0kb downstream 24010 true SL2.50ch10: 4387214-4411223 Solanum lycopersicum
Solyc10g012060.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 4401224-4411223 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473363 5263 Asterids View MSA
123740011 5271 Pentapetalae View MSA
122793635 5272 Eudicot View MSA
122042686 5273 Angiosperm View MSA
121351031 5274 Embryophyte View MSA
123427972 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain