Gene : Solyc01g112170.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR10183//PTHR10183:SF323 - CALPAIN // SUBFAMILY NOT NAMED Description:  Calcium-dependent protein kinase (AHRD V1 **-* Q9S7Z4_MARPO); contains Interpro domain(s) IPR011992 EF-Hand type
Genomic Order:  4264 Name:  ? Solyc01g112170.2
Secondary Identifier:  ? PAC:36139509
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g112170.2 0.5kb upstream 0.5kb upstream 5032 true SL2.50ch01: 98237508-98242539 Solanum lycopersicum
Solyc01g112170.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 98242040-98242539 Solanum lycopersicum
Solyc01g112170.2 0.5kb downstream 0.5kb downstream 5032 true SL2.50ch01: 98237008-98242039 Solanum lycopersicum
Solyc01g112170.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 98237008-98237507 Solanum lycopersicum
Solyc01g112170.2 1.0kb upstream 1.0kb upstream 5532 true SL2.50ch01: 98237508-98243039 Solanum lycopersicum
Solyc01g112170.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 98242040-98243039 Solanum lycopersicum
Solyc01g112170.2 1.0kb downstream 1.0kb downstream 5532 true SL2.50ch01: 98236508-98242039 Solanum lycopersicum
Solyc01g112170.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 98236508-98237507 Solanum lycopersicum
Solyc01g112170.2 2.0kb upstream 2.0kb upstream 6532 true SL2.50ch01: 98237508-98244039 Solanum lycopersicum
Solyc01g112170.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 98242040-98244039 Solanum lycopersicum
Solyc01g112170.2 2.0kb downstream 2.0kb downstream 6532 true SL2.50ch01: 98235508-98242039 Solanum lycopersicum
Solyc01g112170.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 98235508-98237507 Solanum lycopersicum
Solyc01g112170.2 5.0kb upstream 5.0kb upstream 9532 true SL2.50ch01: 98237508-98247039 Solanum lycopersicum
Solyc01g112170.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 98242040-98247039 Solanum lycopersicum
Solyc01g112170.2 5.0kb downstream 5.0kb downstream 9532 true SL2.50ch01: 98232508-98242039 Solanum lycopersicum
Solyc01g112170.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 98232508-98237507 Solanum lycopersicum
Solyc01g112170.2 10.0kb upstream 10.0kb upstream 14532 true SL2.50ch01: 98237508-98252039 Solanum lycopersicum
Solyc01g112170.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 98242040-98252039 Solanum lycopersicum
Solyc01g112170.2 10.0kb downstream 10.0kb downstream 14532 true SL2.50ch01: 98227508-98242039 Solanum lycopersicum
Solyc01g112170.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 98227508-98237507 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026886 5273 Angiosperm View MSA
121468490 5263 Asterids View MSA
123742343 5271 Pentapetalae View MSA
122770269 5272 Eudicot View MSA
121348180 5274 Embryophyte View MSA
123427497 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain