Gene : Solyc10g005110.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) 1.3.3.3 - Coproporphyrinogen oxidase / Coproporphyrinogenase Description:  Coproporphyrinogen III oxidase aerobic (AHRD V1 ***- A9DTF4_9FLAO); contains Interpro domain(s) IPR001260 Coproporphyrinogen III oxidase
Genomic Order:  11 Name:  ? Solyc10g005110.2
Secondary Identifier:  ? PAC:36154376
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum CHLOROPHYLL-SYN Solanum lycopersicum pathologic  
Slycopersicum HEME-BIOSYNTHESIS-II Solanum lycopersicum pathologic  
Slycopersicum PWY-5918 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g005110.2 0.5kb upstream 0.5kb upstream 7885 true SL2.50ch10: 96242-104126 Solanum lycopersicum
Solyc10g005110.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 103627-104126 Solanum lycopersicum
Solyc10g005110.2 0.5kb downstream 0.5kb downstream 7885 true SL2.50ch10: 95742-103626 Solanum lycopersicum
Solyc10g005110.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 95742-96241 Solanum lycopersicum
Solyc10g005110.2 1.0kb upstream 1.0kb upstream 8385 true SL2.50ch10: 96242-104626 Solanum lycopersicum
Solyc10g005110.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 103627-104626 Solanum lycopersicum
Solyc10g005110.2 1.0kb downstream 1.0kb downstream 8385 true SL2.50ch10: 95242-103626 Solanum lycopersicum
Solyc10g005110.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 95242-96241 Solanum lycopersicum
Solyc10g005110.2 2.0kb upstream 2.0kb upstream 9385 true SL2.50ch10: 96242-105626 Solanum lycopersicum
Solyc10g005110.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 103627-105626 Solanum lycopersicum
Solyc10g005110.2 2.0kb downstream 2.0kb downstream 9385 true SL2.50ch10: 94242-103626 Solanum lycopersicum
Solyc10g005110.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 94242-96241 Solanum lycopersicum
Solyc10g005110.2 5.0kb upstream 5.0kb upstream 12385 true SL2.50ch10: 96242-108626 Solanum lycopersicum
Solyc10g005110.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 103627-108626 Solanum lycopersicum
Solyc10g005110.2 5.0kb downstream 5.0kb downstream 12385 true SL2.50ch10: 91242-103626 Solanum lycopersicum
Solyc10g005110.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 91242-96241 Solanum lycopersicum
Solyc10g005110.2 10.0kb upstream 10.0kb upstream 17385 true SL2.50ch10: 96242-113626 Solanum lycopersicum
Solyc10g005110.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 103627-113626 Solanum lycopersicum
Solyc10g005110.2 10.0kb downstream 10.0kb downstream 17385 true SL2.50ch10: 86242-103626 Solanum lycopersicum
Solyc10g005110.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 86242-96241 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468606 5263 Asterids View MSA
123737615 5271 Pentapetalae View MSA
122790941 5272 Eudicot View MSA
122043250 5273 Angiosperm View MSA
121345223 5274 Embryophyte View MSA
123424727 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain