Gene : Solyc01g111690.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) KOG3444 - Uncharacterized conserved protein Description:  Trafficking protein particle complex subunit 2-like protein (AHRD V1 ***- D0N1W2_PHYIN); contains Interpro domain(s) IPR006722 Sedlin
Genomic Order:  4217 Name:  ? Solyc01g111690.2
Secondary Identifier:  ? PAC:36138871
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g111690.2 0.5kb upstream 0.5kb upstream 4454 true SL2.50ch01: 97881632-97886085 Solanum lycopersicum
Solyc01g111690.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 97881632-97882131 Solanum lycopersicum
Solyc01g111690.2 0.5kb downstream 0.5kb downstream 4454 true SL2.50ch01: 97882132-97886585 Solanum lycopersicum
Solyc01g111690.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 97886086-97886585 Solanum lycopersicum
Solyc01g111690.2 1.0kb upstream 1.0kb upstream 4954 true SL2.50ch01: 97881132-97886085 Solanum lycopersicum
Solyc01g111690.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 97881132-97882131 Solanum lycopersicum
Solyc01g111690.2 1.0kb downstream 1.0kb downstream 4954 true SL2.50ch01: 97882132-97887085 Solanum lycopersicum
Solyc01g111690.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 97886086-97887085 Solanum lycopersicum
Solyc01g111690.2 2.0kb upstream 2.0kb upstream 5954 true SL2.50ch01: 97880132-97886085 Solanum lycopersicum
Solyc01g111690.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 97880132-97882131 Solanum lycopersicum
Solyc01g111690.2 2.0kb downstream 2.0kb downstream 5954 true SL2.50ch01: 97882132-97888085 Solanum lycopersicum
Solyc01g111690.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 97886086-97888085 Solanum lycopersicum
Solyc01g111690.2 5.0kb upstream 5.0kb upstream 8954 true SL2.50ch01: 97877132-97886085 Solanum lycopersicum
Solyc01g111690.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 97877132-97882131 Solanum lycopersicum
Solyc01g111690.2 5.0kb downstream 5.0kb downstream 8954 true SL2.50ch01: 97882132-97891085 Solanum lycopersicum
Solyc01g111690.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 97886086-97891085 Solanum lycopersicum
Solyc01g111690.2 10.0kb upstream 10.0kb upstream 13954 true SL2.50ch01: 97872132-97886085 Solanum lycopersicum
Solyc01g111690.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 97872132-97882131 Solanum lycopersicum
Solyc01g111690.2 10.0kb downstream 10.0kb downstream 13954 true SL2.50ch01: 97882132-97896085 Solanum lycopersicum
Solyc01g111690.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 97886086-97896085 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470925 5263 Asterids View MSA
123749455 5271 Pentapetalae View MSA
122790156 5272 Eudicot View MSA
122051418 5273 Angiosperm View MSA
121344842 5274 Embryophyte View MSA
123424203 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain