Protein : Solyc10g081020.1.1 S. lycopersicum ITAG2.4

Secondary Identifier:  PAC:36155610 Organism Name:  Solanum lycopersicum
Length:  1642   Name:  Solyc10g081020.1.1
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Proteins

11 Protein Domains

DB identifier Type Name
IPR012340 Domain Nucleic acid-binding, OB-fold
IPR012337 Domain Ribonuclease H-like domain
IPR003029 Domain S1 domain
IPR027999 Domain Death-like domain of Spt6
IPR017072 Family Transcription elongation factor Spt6
IPR028231 Domain Transcription elongation factor Spt6, YqgF domain
IPR028088 Domain Helix-turn-helix DNA-binding domain of Spt6
IPR000980 Domain SH2 domain
IPR010994 Domain RuvA domain 2-like
IPR022967 Domain RNA-binding domain, S1
IPR028083 Domain Spt6 acidic, N-terminal domain
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
Solyc10g081020.1.1_CDS 4929   SL2.50ch10: 62198212-62207899 Solanum lycopersicum

35 Ontology Annotations

Ontology Term Db Gene/Protein Name
3.2.1.8-RXN METACYC Solyc10g081020.1.1
K11292 KEGG Solyc10g081020.1.1
IPR028231 InterPro Solyc10g081020.1.1
PF14633 PFAM Solyc10g081020.1.1
PF14632 PFAM Solyc10g081020.1.1
PTHR10145:SF6 PANTHER Solyc10g081020.1.1
PTHR10145 PANTHER Solyc10g081020.1.1
IPR027999 InterPro Solyc10g081020.1.1
IPR022967 InterPro Solyc10g081020.1.1
IPR017072 InterPro Solyc10g081020.1.1
IPR028088 InterPro Solyc10g081020.1.1
IPR028083 InterPro Solyc10g081020.1.1
IPR003029 InterPro Solyc10g081020.1.1
IPR000980 InterPro Solyc10g081020.1.1
GO:0032784 GO Solyc10g081020.1.1
GO:0006357 GO Solyc10g081020.1.1
IPR012340 InterPro Solyc10g081020.1.1
IPR012337 InterPro Solyc10g081020.1.1
IPR010994 InterPro Solyc10g081020.1.1
GO:0003677 GO Solyc10g081020.1.1
GO:0003676 GO Solyc10g081020.1.1
G3DSA:3.30.505.10 GENE3D Solyc10g081020.1.1
3.2.1.8 ENZYME Solyc10g081020.1.1
SSF55550 SSF Solyc10g081020.1.1
SSF53098 SSF Solyc10g081020.1.1
SSF50249 SSF Solyc10g081020.1.1
SSF47781 SSF Solyc10g081020.1.1
PF14878 PFAM Solyc10g081020.1.1
PF14641 PFAM Solyc10g081020.1.1
PF14639 PFAM Solyc10g081020.1.1

0 Pathway Components

0 Pathways