Gene : Solyc10g080150.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) K00559 - sterol 24-C-methyltransferase (E2.1.1.41, SMT1, ERG6) Description:  24-sterol C-methyltransferase (AHRD V1 ***- Q2QDF7_GOSHI); contains Interpro domain(s) IPR013705 Sterol methyltransferase C-terminal
Genomic Order:  1984 Name:  ? Solyc10g080150.1
Secondary Identifier:  ? PAC:36154680
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-2541 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g080150.1 0.5kb upstream 0.5kb upstream 5050 true SL2.50ch10: 61526826-61531875 Solanum lycopersicum
Solyc10g080150.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 61531376-61531875 Solanum lycopersicum
Solyc10g080150.1 0.5kb downstream 0.5kb downstream 5050 true SL2.50ch10: 61526326-61531375 Solanum lycopersicum
Solyc10g080150.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 61526326-61526825 Solanum lycopersicum
Solyc10g080150.1 1.0kb upstream 1.0kb upstream 5550 true SL2.50ch10: 61526826-61532375 Solanum lycopersicum
Solyc10g080150.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 61531376-61532375 Solanum lycopersicum
Solyc10g080150.1 1.0kb downstream 1.0kb downstream 5550 true SL2.50ch10: 61525826-61531375 Solanum lycopersicum
Solyc10g080150.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 61525826-61526825 Solanum lycopersicum
Solyc10g080150.1 2.0kb upstream 2.0kb upstream 6550 true SL2.50ch10: 61526826-61533375 Solanum lycopersicum
Solyc10g080150.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 61531376-61533375 Solanum lycopersicum
Solyc10g080150.1 2.0kb downstream 2.0kb downstream 6550 true SL2.50ch10: 61524826-61531375 Solanum lycopersicum
Solyc10g080150.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 61524826-61526825 Solanum lycopersicum
Solyc10g080150.1 5.0kb upstream 5.0kb upstream 9550 true SL2.50ch10: 61526826-61536375 Solanum lycopersicum
Solyc10g080150.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 61531376-61536375 Solanum lycopersicum
Solyc10g080150.1 5.0kb downstream 5.0kb downstream 9550 true SL2.50ch10: 61521826-61531375 Solanum lycopersicum
Solyc10g080150.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 61521826-61526825 Solanum lycopersicum
Solyc10g080150.1 10.0kb upstream 10.0kb upstream 14550 true SL2.50ch10: 61526826-61541375 Solanum lycopersicum
Solyc10g080150.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 61531376-61541375 Solanum lycopersicum
Solyc10g080150.1 10.0kb downstream 10.0kb downstream 14550 true SL2.50ch10: 61516826-61531375 Solanum lycopersicum
Solyc10g080150.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 61516826-61526825 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041479 5273 Angiosperm View MSA
121370679 5263 Asterids Singleton cluster - no MSA
123743908 5271 Pentapetalae View MSA
122793455 5272 Eudicot View MSA
121345470 5274 Embryophyte View MSA
123426805 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain