Gene : Solyc10g080750.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR23086//PTHR23086:SF41 - PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE // SUBFAMILY NOT NAMED Description:  Phosphatidylinositol-4-phosphate 5-kinase family protein (AHRD V1 ***- D7LGK2_ARALY); contains Interpro domain(s) IPR016034 Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup
Genomic Order:  2044 Name:  ? Solyc10g080750.1
Secondary Identifier:  ? PAC:36155207
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-6351 Solanum lycopersicum pathologic  
Slycopersicum PWY-6352 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g080750.1 0.5kb upstream 0.5kb upstream 3093 true SL2.50ch10: 61954620-61957712 Solanum lycopersicum
Solyc10g080750.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 61957213-61957712 Solanum lycopersicum
Solyc10g080750.1 0.5kb downstream 0.5kb downstream 3093 true SL2.50ch10: 61954120-61957212 Solanum lycopersicum
Solyc10g080750.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 61954120-61954619 Solanum lycopersicum
Solyc10g080750.1 1.0kb upstream 1.0kb upstream 3593 true SL2.50ch10: 61954620-61958212 Solanum lycopersicum
Solyc10g080750.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 61957213-61958212 Solanum lycopersicum
Solyc10g080750.1 1.0kb downstream 1.0kb downstream 3593 true SL2.50ch10: 61953620-61957212 Solanum lycopersicum
Solyc10g080750.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 61953620-61954619 Solanum lycopersicum
Solyc10g080750.1 2.0kb upstream 2.0kb upstream 4593 true SL2.50ch10: 61954620-61959212 Solanum lycopersicum
Solyc10g080750.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 61957213-61959212 Solanum lycopersicum
Solyc10g080750.1 2.0kb downstream 2.0kb downstream 4593 true SL2.50ch10: 61952620-61957212 Solanum lycopersicum
Solyc10g080750.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 61952620-61954619 Solanum lycopersicum
Solyc10g080750.1 5.0kb upstream 5.0kb upstream 7593 true SL2.50ch10: 61954620-61962212 Solanum lycopersicum
Solyc10g080750.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 61957213-61962212 Solanum lycopersicum
Solyc10g080750.1 5.0kb downstream 5.0kb downstream 7593 true SL2.50ch10: 61949620-61957212 Solanum lycopersicum
Solyc10g080750.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 61949620-61954619 Solanum lycopersicum
Solyc10g080750.1 10.0kb upstream 10.0kb upstream 12593 true SL2.50ch10: 61954620-61967212 Solanum lycopersicum
Solyc10g080750.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 61957213-61967212 Solanum lycopersicum
Solyc10g080750.1 10.0kb downstream 10.0kb downstream 12593 true SL2.50ch10: 61944620-61957212 Solanum lycopersicum
Solyc10g080750.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 61944620-61954619 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027967 5273 Angiosperm View MSA
121370824 5263 Asterids Singleton cluster - no MSA
123741083 5271 Pentapetalae View MSA
122791627 5272 Eudicot View MSA
121349579 5274 Embryophyte View MSA
123428114 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain