Gene : Solyc10g079230.1 S. lycopersicum ITAG2.4
Defline:  (1 of 24) PF03140 - Plant protein of unknown function (DUF247) Description:  CM0545.450.nc protein (AHRD V1 ***- B0BLB7_LOTJA); contains Interpro domain(s) IPR004158 Protein of unknown function DUF247, plant
Genomic Order:  1892 Name:  ? Solyc10g079230.1
Secondary Identifier:  ? PAC:36154079
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g079230.1 0.5kb upstream 0.5kb upstream 1961 true SL2.50ch10: 60804673-60806633 Solanum lycopersicum
Solyc10g079230.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 60804673-60805172 Solanum lycopersicum
Solyc10g079230.1 0.5kb downstream 0.5kb downstream 1961 true SL2.50ch10: 60805173-60807133 Solanum lycopersicum
Solyc10g079230.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 60806634-60807133 Solanum lycopersicum
Solyc10g079230.1 1.0kb upstream 1.0kb upstream 2461 true SL2.50ch10: 60804173-60806633 Solanum lycopersicum
Solyc10g079230.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 60804173-60805172 Solanum lycopersicum
Solyc10g079230.1 1.0kb downstream 1.0kb downstream 2461 true SL2.50ch10: 60805173-60807633 Solanum lycopersicum
Solyc10g079230.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 60806634-60807633 Solanum lycopersicum
Solyc10g079230.1 2.0kb upstream 2.0kb upstream 3461 true SL2.50ch10: 60803173-60806633 Solanum lycopersicum
Solyc10g079230.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 60803173-60805172 Solanum lycopersicum
Solyc10g079230.1 2.0kb downstream 2.0kb downstream 3461 true SL2.50ch10: 60805173-60808633 Solanum lycopersicum
Solyc10g079230.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 60806634-60808633 Solanum lycopersicum
Solyc10g079230.1 5.0kb upstream 5.0kb upstream 6461 true SL2.50ch10: 60800173-60806633 Solanum lycopersicum
Solyc10g079230.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 60800173-60805172 Solanum lycopersicum
Solyc10g079230.1 5.0kb downstream 5.0kb downstream 6461 true SL2.50ch10: 60805173-60811633 Solanum lycopersicum
Solyc10g079230.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 60806634-60811633 Solanum lycopersicum
Solyc10g079230.1 10.0kb upstream 10.0kb upstream 11461 true SL2.50ch10: 60795173-60806633 Solanum lycopersicum
Solyc10g079230.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 60795173-60805172 Solanum lycopersicum
Solyc10g079230.1 10.0kb downstream 10.0kb downstream 11461 true SL2.50ch10: 60805173-60816633 Solanum lycopersicum
Solyc10g079230.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 60806634-60816633 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475664 5263 Asterids View MSA
123753721 5271 Pentapetalae View MSA
122797892 5272 Eudicot View MSA
122051031 5273 Angiosperm View MSA
121351531 5274 Embryophyte View MSA
123382209 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain