Gene : Solyc10g079120.1 S. lycopersicum ITAG2.4
Defline:  (1 of 5) PTHR14493:SF47 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 Description:  Zinc finger CCCH domain-containing protein 30 (AHRD V1 **-- C3H30_ARATH); contains Interpro domain(s) IPR002110 Ankyrin
Genomic Order:  1881 Name:  ? Solyc10g079120.1
Secondary Identifier:  ? PAC:36155654
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g079120.1 0.5kb upstream 0.5kb upstream 2612 true SL2.50ch10: 60728904-60731515 Solanum lycopersicum
Solyc10g079120.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 60731016-60731515 Solanum lycopersicum
Solyc10g079120.1 0.5kb downstream 0.5kb downstream 2612 true SL2.50ch10: 60728404-60731015 Solanum lycopersicum
Solyc10g079120.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 60728404-60728903 Solanum lycopersicum
Solyc10g079120.1 1.0kb upstream 1.0kb upstream 3112 true SL2.50ch10: 60728904-60732015 Solanum lycopersicum
Solyc10g079120.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 60731016-60732015 Solanum lycopersicum
Solyc10g079120.1 1.0kb downstream 1.0kb downstream 3112 true SL2.50ch10: 60727904-60731015 Solanum lycopersicum
Solyc10g079120.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 60727904-60728903 Solanum lycopersicum
Solyc10g079120.1 2.0kb upstream 2.0kb upstream 4112 true SL2.50ch10: 60728904-60733015 Solanum lycopersicum
Solyc10g079120.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 60731016-60733015 Solanum lycopersicum
Solyc10g079120.1 2.0kb downstream 2.0kb downstream 4112 true SL2.50ch10: 60726904-60731015 Solanum lycopersicum
Solyc10g079120.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 60726904-60728903 Solanum lycopersicum
Solyc10g079120.1 5.0kb upstream 5.0kb upstream 7112 true SL2.50ch10: 60728904-60736015 Solanum lycopersicum
Solyc10g079120.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 60731016-60736015 Solanum lycopersicum
Solyc10g079120.1 5.0kb downstream 5.0kb downstream 7112 true SL2.50ch10: 60723904-60731015 Solanum lycopersicum
Solyc10g079120.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 60723904-60728903 Solanum lycopersicum
Solyc10g079120.1 10.0kb upstream 10.0kb upstream 12112 true SL2.50ch10: 60728904-60741015 Solanum lycopersicum
Solyc10g079120.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 60731016-60741015 Solanum lycopersicum
Solyc10g079120.1 10.0kb downstream 10.0kb downstream 12112 true SL2.50ch10: 60718904-60731015 Solanum lycopersicum
Solyc10g079120.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 60718904-60728903 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479137 5263 Asterids View MSA
123746400 5271 Pentapetalae View MSA
122787606 5272 Eudicot View MSA
122046013 5273 Angiosperm View MSA
123429052 5275 Viridiplantae View MSA
121351105 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain