Gene : Solyc10g079410.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K14674 - TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase (TGL4) Description:  Patatin-like phospholipase domain-containing protein c (AHRD V1 *--- B6K1H8_SCHJY); contains Interpro domain(s) IPR006689 ARF/SAR superfamily
Genomic Order:  1910 Name:  ? Solyc10g079410.1
Secondary Identifier:  ? PAC:36154475
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum LIPAS-PWY Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g079410.1 0.5kb upstream 0.5kb upstream 3308 true SL2.50ch10: 60948583-60951890 Solanum lycopersicum
Solyc10g079410.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 60948583-60949082 Solanum lycopersicum
Solyc10g079410.1 0.5kb downstream 0.5kb downstream 3308 true SL2.50ch10: 60949083-60952390 Solanum lycopersicum
Solyc10g079410.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 60951891-60952390 Solanum lycopersicum
Solyc10g079410.1 1.0kb upstream 1.0kb upstream 3808 true SL2.50ch10: 60948083-60951890 Solanum lycopersicum
Solyc10g079410.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 60948083-60949082 Solanum lycopersicum
Solyc10g079410.1 1.0kb downstream 1.0kb downstream 3808 true SL2.50ch10: 60949083-60952890 Solanum lycopersicum
Solyc10g079410.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 60951891-60952890 Solanum lycopersicum
Solyc10g079410.1 2.0kb upstream 2.0kb upstream 4808 true SL2.50ch10: 60947083-60951890 Solanum lycopersicum
Solyc10g079410.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 60947083-60949082 Solanum lycopersicum
Solyc10g079410.1 2.0kb downstream 2.0kb downstream 4808 true SL2.50ch10: 60949083-60953890 Solanum lycopersicum
Solyc10g079410.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 60951891-60953890 Solanum lycopersicum
Solyc10g079410.1 5.0kb upstream 5.0kb upstream 7808 true SL2.50ch10: 60944083-60951890 Solanum lycopersicum
Solyc10g079410.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 60944083-60949082 Solanum lycopersicum
Solyc10g079410.1 5.0kb downstream 5.0kb downstream 7808 true SL2.50ch10: 60949083-60956890 Solanum lycopersicum
Solyc10g079410.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 60951891-60956890 Solanum lycopersicum
Solyc10g079410.1 10.0kb upstream 10.0kb upstream 12808 true SL2.50ch10: 60939083-60951890 Solanum lycopersicum
Solyc10g079410.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 60939083-60949082 Solanum lycopersicum
Solyc10g079410.1 10.0kb downstream 10.0kb downstream 12808 true SL2.50ch10: 60949083-60961890 Solanum lycopersicum
Solyc10g079410.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 60951891-60961890 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467093 5263 Asterids View MSA
123736830 5271 Pentapetalae View MSA
122788916 5272 Eudicot View MSA
122044484 5273 Angiosperm View MSA
121347112 5274 Embryophyte View MSA
123426433 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain