Gene : Solyc10g079360.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR11618:SF27 - CYCLIN FAMILY PROTEIN-RELATED Description:  Transcription initiation factor IIB-2 (AHRD V1 ***- D7L8X6_ARALY); contains Interpro domain(s) IPR000812 Transcription factor TFIIB related
Genomic Order:  1905 Name:  ? Solyc10g079360.1
Secondary Identifier:  ? PAC:36156423
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g079360.1 0.5kb upstream 0.5kb upstream 5598 true SL2.50ch10: 60906838-60912435 Solanum lycopersicum
Solyc10g079360.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 60911936-60912435 Solanum lycopersicum
Solyc10g079360.1 0.5kb downstream 0.5kb downstream 5598 true SL2.50ch10: 60906338-60911935 Solanum lycopersicum
Solyc10g079360.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 60906338-60906837 Solanum lycopersicum
Solyc10g079360.1 1.0kb upstream 1.0kb upstream 6098 true SL2.50ch10: 60906838-60912935 Solanum lycopersicum
Solyc10g079360.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 60911936-60912935 Solanum lycopersicum
Solyc10g079360.1 1.0kb downstream 1.0kb downstream 6098 true SL2.50ch10: 60905838-60911935 Solanum lycopersicum
Solyc10g079360.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 60905838-60906837 Solanum lycopersicum
Solyc10g079360.1 2.0kb upstream 2.0kb upstream 7098 true SL2.50ch10: 60906838-60913935 Solanum lycopersicum
Solyc10g079360.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 60911936-60913935 Solanum lycopersicum
Solyc10g079360.1 2.0kb downstream 2.0kb downstream 7098 true SL2.50ch10: 60904838-60911935 Solanum lycopersicum
Solyc10g079360.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 60904838-60906837 Solanum lycopersicum
Solyc10g079360.1 5.0kb upstream 5.0kb upstream 10098 true SL2.50ch10: 60906838-60916935 Solanum lycopersicum
Solyc10g079360.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 60911936-60916935 Solanum lycopersicum
Solyc10g079360.1 5.0kb downstream 5.0kb downstream 10098 true SL2.50ch10: 60901838-60911935 Solanum lycopersicum
Solyc10g079360.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 60901838-60906837 Solanum lycopersicum
Solyc10g079360.1 10.0kb upstream 10.0kb upstream 15098 true SL2.50ch10: 60906838-60921935 Solanum lycopersicum
Solyc10g079360.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 60911936-60921935 Solanum lycopersicum
Solyc10g079360.1 10.0kb downstream 10.0kb downstream 15098 true SL2.50ch10: 60896838-60911935 Solanum lycopersicum
Solyc10g079360.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 60896838-60906837 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478607 5263 Asterids View MSA
123736384 5271 Pentapetalae View MSA
122797589 5272 Eudicot View MSA
122045994 5273 Angiosperm View MSA
121350308 5274 Embryophyte View MSA
123427568 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain