Gene : Solyc10g078480.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) 2.4.1.142 - Chitobiosyldiphosphodolichol beta-mannosyltransferase / mannosyltransferase Description:  Chitobiosyldiphosphodolichol beta-mannosyltransferase (AHRD V1 ***- B0WIW8_CULQU); contains Interpro domain(s) IPR001296 Glycosyl transferase, group 1
Genomic Order:  1817 Name:  ? Solyc10g078480.1
Secondary Identifier:  ? PAC:36155784
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g078480.1 0.5kb upstream 0.5kb upstream 6416 true SL2.50ch10: 60291560-60297975 Solanum lycopersicum
Solyc10g078480.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 60297476-60297975 Solanum lycopersicum
Solyc10g078480.1 0.5kb downstream 0.5kb downstream 6416 true SL2.50ch10: 60291060-60297475 Solanum lycopersicum
Solyc10g078480.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 60291060-60291559 Solanum lycopersicum
Solyc10g078480.1 1.0kb upstream 1.0kb upstream 6916 true SL2.50ch10: 60291560-60298475 Solanum lycopersicum
Solyc10g078480.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 60297476-60298475 Solanum lycopersicum
Solyc10g078480.1 1.0kb downstream 1.0kb downstream 6916 true SL2.50ch10: 60290560-60297475 Solanum lycopersicum
Solyc10g078480.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 60290560-60291559 Solanum lycopersicum
Solyc10g078480.1 2.0kb upstream 2.0kb upstream 7916 true SL2.50ch10: 60291560-60299475 Solanum lycopersicum
Solyc10g078480.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 60297476-60299475 Solanum lycopersicum
Solyc10g078480.1 2.0kb downstream 2.0kb downstream 7916 true SL2.50ch10: 60289560-60297475 Solanum lycopersicum
Solyc10g078480.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 60289560-60291559 Solanum lycopersicum
Solyc10g078480.1 5.0kb upstream 5.0kb upstream 10916 true SL2.50ch10: 60291560-60302475 Solanum lycopersicum
Solyc10g078480.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 60297476-60302475 Solanum lycopersicum
Solyc10g078480.1 5.0kb downstream 5.0kb downstream 10916 true SL2.50ch10: 60286560-60297475 Solanum lycopersicum
Solyc10g078480.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 60286560-60291559 Solanum lycopersicum
Solyc10g078480.1 10.0kb upstream 10.0kb upstream 15916 true SL2.50ch10: 60291560-60307475 Solanum lycopersicum
Solyc10g078480.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 60297476-60307475 Solanum lycopersicum
Solyc10g078480.1 10.0kb downstream 10.0kb downstream 15916 true SL2.50ch10: 60281560-60297475 Solanum lycopersicum
Solyc10g078480.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 60281560-60291559 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474242 5263 Asterids View MSA
123740447 5271 Pentapetalae View MSA
122785906 5272 Eudicot View MSA
122046211 5273 Angiosperm View MSA
123429023 5275 Viridiplantae View MSA
121347340 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain