Gene : Solyc04g076640.1 S. lycopersicum ITAG2.4
Defline:  (1 of 5) PTHR32018:SF1 - F21M12.27 PROTEIN-RELATED Description:  Rhamnogalacturonate lyase (AHRD V1 **** A3XLZ2_LEEBM); contains Interpro domain(s) IPR010325 Rhamnogalacturonate lyase
Genomic Order:  2111 Name:  ? Solyc04g076640.1
Secondary Identifier:  ? PAC:36143701
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g076640.1 0.5kb upstream 0.5kb upstream 4796 true SL2.50ch04: 61539044-61543839 Solanum lycopersicum
Solyc04g076640.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 61543340-61543839 Solanum lycopersicum
Solyc04g076640.1 0.5kb downstream 0.5kb downstream 4796 true SL2.50ch04: 61538544-61543339 Solanum lycopersicum
Solyc04g076640.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 61538544-61539043 Solanum lycopersicum
Solyc04g076640.1 1.0kb upstream 1.0kb upstream 5296 true SL2.50ch04: 61539044-61544339 Solanum lycopersicum
Solyc04g076640.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 61543340-61544339 Solanum lycopersicum
Solyc04g076640.1 1.0kb downstream 1.0kb downstream 5296 true SL2.50ch04: 61538044-61543339 Solanum lycopersicum
Solyc04g076640.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 61538044-61539043 Solanum lycopersicum
Solyc04g076640.1 2.0kb upstream 2.0kb upstream 6296 true SL2.50ch04: 61539044-61545339 Solanum lycopersicum
Solyc04g076640.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 61543340-61545339 Solanum lycopersicum
Solyc04g076640.1 2.0kb downstream 2.0kb downstream 6296 true SL2.50ch04: 61537044-61543339 Solanum lycopersicum
Solyc04g076640.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 61537044-61539043 Solanum lycopersicum
Solyc04g076640.1 5.0kb upstream 5.0kb upstream 9296 true SL2.50ch04: 61539044-61548339 Solanum lycopersicum
Solyc04g076640.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 61543340-61548339 Solanum lycopersicum
Solyc04g076640.1 5.0kb downstream 5.0kb downstream 9296 true SL2.50ch04: 61534044-61543339 Solanum lycopersicum
Solyc04g076640.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 61534044-61539043 Solanum lycopersicum
Solyc04g076640.1 10.0kb upstream 10.0kb upstream 14296 true SL2.50ch04: 61539044-61553339 Solanum lycopersicum
Solyc04g076640.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 61543340-61553339 Solanum lycopersicum
Solyc04g076640.1 10.0kb downstream 10.0kb downstream 14296 true SL2.50ch04: 61529044-61543339 Solanum lycopersicum
Solyc04g076640.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 61529044-61539043 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041153 5273 Angiosperm View MSA
121476882 5263 Asterids View MSA
123741436 5271 Pentapetalae View MSA
122791943 5272 Eudicot View MSA
121347296 5274 Embryophyte View MSA
123380523 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain