Gene : Solyc04g056540.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR11079//PTHR11079:SF76 - CYTOSINE DEAMINASE // SUBFAMILY NOT NAMED Description:  Riboflavin biosynthesis protein RibD (AHRD V1 ***- B2J2B9_NOSP7); contains Interpro domain(s) IPR004794 Riboflavin biosynthesis protein RibD
Genomic Order:  1604 Name:  ? Solyc04g056540.2
Secondary Identifier:  ? PAC:36142010
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g056540.2 0.5kb upstream 0.5kb upstream 9977 true SL2.50ch04: 54490107-54500083 Solanum lycopersicum
Solyc04g056540.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 54490107-54490606 Solanum lycopersicum
Solyc04g056540.2 0.5kb downstream 0.5kb downstream 9977 true SL2.50ch04: 54490607-54500583 Solanum lycopersicum
Solyc04g056540.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 54500084-54500583 Solanum lycopersicum
Solyc04g056540.2 1.0kb upstream 1.0kb upstream 10477 true SL2.50ch04: 54489607-54500083 Solanum lycopersicum
Solyc04g056540.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 54489607-54490606 Solanum lycopersicum
Solyc04g056540.2 1.0kb downstream 1.0kb downstream 10477 true SL2.50ch04: 54490607-54501083 Solanum lycopersicum
Solyc04g056540.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 54500084-54501083 Solanum lycopersicum
Solyc04g056540.2 2.0kb upstream 2.0kb upstream 11477 true SL2.50ch04: 54488607-54500083 Solanum lycopersicum
Solyc04g056540.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 54488607-54490606 Solanum lycopersicum
Solyc04g056540.2 2.0kb downstream 2.0kb downstream 11477 true SL2.50ch04: 54490607-54502083 Solanum lycopersicum
Solyc04g056540.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 54500084-54502083 Solanum lycopersicum
Solyc04g056540.2 5.0kb upstream 5.0kb upstream 14477 true SL2.50ch04: 54485607-54500083 Solanum lycopersicum
Solyc04g056540.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 54485607-54490606 Solanum lycopersicum
Solyc04g056540.2 5.0kb downstream 5.0kb downstream 14477 true SL2.50ch04: 54490607-54505083 Solanum lycopersicum
Solyc04g056540.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 54500084-54505083 Solanum lycopersicum
Solyc04g056540.2 10.0kb upstream 10.0kb upstream 19477 true SL2.50ch04: 54480607-54500083 Solanum lycopersicum
Solyc04g056540.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 54480607-54490606 Solanum lycopersicum
Solyc04g056540.2 10.0kb downstream 10.0kb downstream 19477 true SL2.50ch04: 54490607-54510083 Solanum lycopersicum
Solyc04g056540.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 54500084-54510083 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466323 5263 Asterids View MSA
123745223 5271 Pentapetalae View MSA
122789870 5272 Eudicot View MSA
122046353 5273 Angiosperm View MSA
121346700 5274 Embryophyte View MSA
123428398 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain