Gene : Solyc04g053120.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) 2.4.1.25 - 4-alpha-glucanotransferase / Oligo-1,4-1,4-glucantransferase Description:  4-alpha-glucanotransferase (AHRD V1 ***- Q9LV91_ARATH); contains Interpro domain(s) IPR003385 Glycoside hydrolase, family 77
Genomic Order:  1471 Name:  ? Solyc04g053120.2
Secondary Identifier:  ? PAC:36142551
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-6724 Solanum lycopersicum pathologic  
Slycopersicum PWY-7238 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g053120.2 0.5kb upstream 0.5kb upstream 6955 true SL2.50ch04: 51716404-51723358 Solanum lycopersicum
Solyc04g053120.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 51722859-51723358 Solanum lycopersicum
Solyc04g053120.2 0.5kb downstream 0.5kb downstream 6955 true SL2.50ch04: 51715904-51722858 Solanum lycopersicum
Solyc04g053120.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 51715904-51716403 Solanum lycopersicum
Solyc04g053120.2 1.0kb upstream 1.0kb upstream 7455 true SL2.50ch04: 51716404-51723858 Solanum lycopersicum
Solyc04g053120.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 51722859-51723858 Solanum lycopersicum
Solyc04g053120.2 1.0kb downstream 1.0kb downstream 7455 true SL2.50ch04: 51715404-51722858 Solanum lycopersicum
Solyc04g053120.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 51715404-51716403 Solanum lycopersicum
Solyc04g053120.2 2.0kb upstream 2.0kb upstream 8455 true SL2.50ch04: 51716404-51724858 Solanum lycopersicum
Solyc04g053120.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 51722859-51724858 Solanum lycopersicum
Solyc04g053120.2 2.0kb downstream 2.0kb downstream 8455 true SL2.50ch04: 51714404-51722858 Solanum lycopersicum
Solyc04g053120.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 51714404-51716403 Solanum lycopersicum
Solyc04g053120.2 5.0kb upstream 5.0kb upstream 11455 true SL2.50ch04: 51716404-51727858 Solanum lycopersicum
Solyc04g053120.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 51722859-51727858 Solanum lycopersicum
Solyc04g053120.2 5.0kb downstream 5.0kb downstream 11455 true SL2.50ch04: 51711404-51722858 Solanum lycopersicum
Solyc04g053120.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 51711404-51716403 Solanum lycopersicum
Solyc04g053120.2 10.0kb upstream 10.0kb upstream 16455 true SL2.50ch04: 51716404-51732858 Solanum lycopersicum
Solyc04g053120.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 51722859-51732858 Solanum lycopersicum
Solyc04g053120.2 10.0kb downstream 10.0kb downstream 16455 true SL2.50ch04: 51706404-51722858 Solanum lycopersicum
Solyc04g053120.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 51706404-51716403 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474461 5263 Asterids View MSA
123741915 5271 Pentapetalae View MSA
122794283 5272 Eudicot View MSA
122048475 5273 Angiosperm View MSA
121348239 5274 Embryophyte View MSA
123427426 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain