Gene : Solyc04g049550.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) 2.7.8.5 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase / Phosphatidylglycerophosphate synthase Description:  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (AHRD V1 *-** PGSA_YERE8); contains Interpro domain(s) IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Genomic Order:  1232 Name:  ? Solyc04g049550.2
Secondary Identifier:  ? PAC:36143632
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY4FS-7 Solanum lycopersicum pathologic  
Slycopersicum PWY-5269 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g049550.2 0.5kb upstream 0.5kb upstream 14122 true SL2.50ch04: 42510175-42524296 Solanum lycopersicum
Solyc04g049550.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 42523797-42524296 Solanum lycopersicum
Solyc04g049550.2 0.5kb downstream 0.5kb downstream 14122 true SL2.50ch04: 42509675-42523796 Solanum lycopersicum
Solyc04g049550.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 42509675-42510174 Solanum lycopersicum
Solyc04g049550.2 1.0kb upstream 1.0kb upstream 14622 true SL2.50ch04: 42510175-42524796 Solanum lycopersicum
Solyc04g049550.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 42523797-42524796 Solanum lycopersicum
Solyc04g049550.2 1.0kb downstream 1.0kb downstream 14622 true SL2.50ch04: 42509175-42523796 Solanum lycopersicum
Solyc04g049550.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 42509175-42510174 Solanum lycopersicum
Solyc04g049550.2 2.0kb upstream 2.0kb upstream 15622 true SL2.50ch04: 42510175-42525796 Solanum lycopersicum
Solyc04g049550.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 42523797-42525796 Solanum lycopersicum
Solyc04g049550.2 2.0kb downstream 2.0kb downstream 15622 true SL2.50ch04: 42508175-42523796 Solanum lycopersicum
Solyc04g049550.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 42508175-42510174 Solanum lycopersicum
Solyc04g049550.2 5.0kb upstream 5.0kb upstream 18622 true SL2.50ch04: 42510175-42528796 Solanum lycopersicum
Solyc04g049550.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 42523797-42528796 Solanum lycopersicum
Solyc04g049550.2 5.0kb downstream 5.0kb downstream 18622 true SL2.50ch04: 42505175-42523796 Solanum lycopersicum
Solyc04g049550.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 42505175-42510174 Solanum lycopersicum
Solyc04g049550.2 10.0kb upstream 10.0kb upstream 23622 true SL2.50ch04: 42510175-42533796 Solanum lycopersicum
Solyc04g049550.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 42523797-42533796 Solanum lycopersicum
Solyc04g049550.2 10.0kb downstream 10.0kb downstream 23622 true SL2.50ch04: 42500175-42523796 Solanum lycopersicum
Solyc04g049550.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 42500175-42510174 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041214 5273 Angiosperm View MSA
121473121 5263 Asterids View MSA
123750355 5271 Pentapetalae View MSA
122791473 5272 Eudicot View MSA
121349383 5274 Embryophyte View MSA
123424626 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain