Gene : Solyc04g045310.2 S. lycopersicum ITAG2.4
Defline:  (1 of 6) PF12056 - Protein of unknown function (DUF3537) (DUF3537) Description:  Extracellular ligand-gated ion channel (AHRD V1 **-- D7LAY2_ARALY)
Genomic Order:  1114 Name:  ? Solyc04g045310.2
Secondary Identifier:  ? PAC:36141502
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g045310.2 0.5kb upstream 0.5kb upstream 3235 true SL2.50ch04: 32327292-32330526 Solanum lycopersicum
Solyc04g045310.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 32330027-32330526 Solanum lycopersicum
Solyc04g045310.2 0.5kb downstream 0.5kb downstream 3235 true SL2.50ch04: 32326792-32330026 Solanum lycopersicum
Solyc04g045310.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 32326792-32327291 Solanum lycopersicum
Solyc04g045310.2 1.0kb upstream 1.0kb upstream 3735 true SL2.50ch04: 32327292-32331026 Solanum lycopersicum
Solyc04g045310.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 32330027-32331026 Solanum lycopersicum
Solyc04g045310.2 1.0kb downstream 1.0kb downstream 3735 true SL2.50ch04: 32326292-32330026 Solanum lycopersicum
Solyc04g045310.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 32326292-32327291 Solanum lycopersicum
Solyc04g045310.2 2.0kb upstream 2.0kb upstream 4735 true SL2.50ch04: 32327292-32332026 Solanum lycopersicum
Solyc04g045310.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 32330027-32332026 Solanum lycopersicum
Solyc04g045310.2 2.0kb downstream 2.0kb downstream 4735 true SL2.50ch04: 32325292-32330026 Solanum lycopersicum
Solyc04g045310.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 32325292-32327291 Solanum lycopersicum
Solyc04g045310.2 5.0kb upstream 5.0kb upstream 7735 true SL2.50ch04: 32327292-32335026 Solanum lycopersicum
Solyc04g045310.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 32330027-32335026 Solanum lycopersicum
Solyc04g045310.2 5.0kb downstream 5.0kb downstream 7735 true SL2.50ch04: 32322292-32330026 Solanum lycopersicum
Solyc04g045310.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 32322292-32327291 Solanum lycopersicum
Solyc04g045310.2 10.0kb upstream 10.0kb upstream 12735 true SL2.50ch04: 32327292-32340026 Solanum lycopersicum
Solyc04g045310.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 32330027-32340026 Solanum lycopersicum
Solyc04g045310.2 10.0kb downstream 10.0kb downstream 12735 true SL2.50ch04: 32317292-32330026 Solanum lycopersicum
Solyc04g045310.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 32317292-32327291 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476537 5263 Asterids View MSA
123750273 5271 Pentapetalae View MSA
122773558 5272 Eudicot View MSA
122045832 5273 Angiosperm View MSA
121310512 5274 Embryophyte View MSA
123347975 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain