Gene : Solyc04g026200.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) K16287 - ubiquitin-like-specific protease 1C/D [EC:3.4.22.68] (ULP1C_D) Description:  Sentrin-specific protease 2 (AHRD V1 *-** B6TMK2_MAIZE); contains Interpro domain(s) IPR003653 Peptidase C48, SUMO/Sentrin/Ubl1
Genomic Order:  931 Name:  ? Solyc04g026200.2
Secondary Identifier:  ? PAC:36142708
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g026200.2 0.5kb upstream 0.5kb upstream 30636 true SL2.50ch04: 18386997-18417632 Solanum lycopersicum
Solyc04g026200.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 18417133-18417632 Solanum lycopersicum
Solyc04g026200.2 0.5kb downstream 0.5kb downstream 30636 true SL2.50ch04: 18386497-18417132 Solanum lycopersicum
Solyc04g026200.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 18386497-18386996 Solanum lycopersicum
Solyc04g026200.2 1.0kb upstream 1.0kb upstream 31136 true SL2.50ch04: 18386997-18418132 Solanum lycopersicum
Solyc04g026200.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 18417133-18418132 Solanum lycopersicum
Solyc04g026200.2 1.0kb downstream 1.0kb downstream 31136 true SL2.50ch04: 18385997-18417132 Solanum lycopersicum
Solyc04g026200.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 18385997-18386996 Solanum lycopersicum
Solyc04g026200.2 2.0kb upstream 2.0kb upstream 32136 true SL2.50ch04: 18386997-18419132 Solanum lycopersicum
Solyc04g026200.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 18417133-18419132 Solanum lycopersicum
Solyc04g026200.2 2.0kb downstream 2.0kb downstream 32136 true SL2.50ch04: 18384997-18417132 Solanum lycopersicum
Solyc04g026200.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 18384997-18386996 Solanum lycopersicum
Solyc04g026200.2 5.0kb upstream 5.0kb upstream 35136 true SL2.50ch04: 18386997-18422132 Solanum lycopersicum
Solyc04g026200.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 18417133-18422132 Solanum lycopersicum
Solyc04g026200.2 5.0kb downstream 5.0kb downstream 35136 true SL2.50ch04: 18381997-18417132 Solanum lycopersicum
Solyc04g026200.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 18381997-18386996 Solanum lycopersicum
Solyc04g026200.2 10.0kb upstream 10.0kb upstream 40136 true SL2.50ch04: 18386997-18427132 Solanum lycopersicum
Solyc04g026200.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 18417133-18427132 Solanum lycopersicum
Solyc04g026200.2 10.0kb downstream 10.0kb downstream 40136 true SL2.50ch04: 18376997-18417132 Solanum lycopersicum
Solyc04g026200.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 18376997-18386996 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122792436 5272 Eudicot View MSA
121476781 5263 Asterids View MSA
123747374 5271 Pentapetalae View MSA
122047902 5273 Angiosperm View MSA
123429184 5275 Viridiplantae View MSA
121351646 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain