Gene : Solyc12g011280.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) K08909 - light-harvesting complex I chlorophyll a/b binding protein 3 (LHCA3) Description:  Chlorophyll a-b binding protein 8, chloroplastic (AHRD V1 ***- CB13_SOLLC); contains Interpro domain(s) IPR001344 Chlorophyll A-B binding protein
Genomic Order:  529 Name:  ? Solyc12g011280.1
Secondary Identifier:  ? PAC:36148779
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g011280.1 0.5kb upstream 0.5kb upstream 1840 true SL2.50ch12: 4139454-4141293 Solanum lycopersicum
Solyc12g011280.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 4140794-4141293 Solanum lycopersicum
Solyc12g011280.1 0.5kb downstream 0.5kb downstream 1840 true SL2.50ch12: 4138954-4140793 Solanum lycopersicum
Solyc12g011280.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 4138954-4139453 Solanum lycopersicum
Solyc12g011280.1 1.0kb upstream 1.0kb upstream 2340 true SL2.50ch12: 4139454-4141793 Solanum lycopersicum
Solyc12g011280.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 4140794-4141793 Solanum lycopersicum
Solyc12g011280.1 1.0kb downstream 1.0kb downstream 2340 true SL2.50ch12: 4138454-4140793 Solanum lycopersicum
Solyc12g011280.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 4138454-4139453 Solanum lycopersicum
Solyc12g011280.1 2.0kb upstream 2.0kb upstream 3340 true SL2.50ch12: 4139454-4142793 Solanum lycopersicum
Solyc12g011280.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 4140794-4142793 Solanum lycopersicum
Solyc12g011280.1 2.0kb downstream 2.0kb downstream 3340 true SL2.50ch12: 4137454-4140793 Solanum lycopersicum
Solyc12g011280.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 4137454-4139453 Solanum lycopersicum
Solyc12g011280.1 5.0kb upstream 5.0kb upstream 6340 true SL2.50ch12: 4139454-4145793 Solanum lycopersicum
Solyc12g011280.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 4140794-4145793 Solanum lycopersicum
Solyc12g011280.1 5.0kb downstream 5.0kb downstream 6340 true SL2.50ch12: 4134454-4140793 Solanum lycopersicum
Solyc12g011280.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 4134454-4139453 Solanum lycopersicum
Solyc12g011280.1 10.0kb upstream 10.0kb upstream 11340 true SL2.50ch12: 4139454-4150793 Solanum lycopersicum
Solyc12g011280.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 4140794-4150793 Solanum lycopersicum
Solyc12g011280.1 10.0kb downstream 10.0kb downstream 11340 true SL2.50ch12: 4129454-4140793 Solanum lycopersicum
Solyc12g011280.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 4129454-4139453 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040894 5273 Angiosperm View MSA
121480244 5263 Asterids View MSA
123739119 5271 Pentapetalae View MSA
122792428 5272 Eudicot View MSA
121345574 5274 Embryophyte View MSA
123424103 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain