Gene : Solyc12g006140.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) K08913 - light-harvesting complex II chlorophyll a/b binding protein 2 (LHCB2) Description:  Chlorophyll a-b binding protein 37, chloroplastic (AHRD V1 ***- CB26_PETSP); contains Interpro domain(s) IPR001344 Chlorophyll A-B binding protein
Genomic Order:  114 Name:  ? Solyc12g006140.1
Secondary Identifier:  ? PAC:36148075
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g006140.1 0.5kb upstream 0.5kb upstream 1866 true SL2.50ch12: 693217-695082 Solanum lycopersicum
Solyc12g006140.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 694583-695082 Solanum lycopersicum
Solyc12g006140.1 0.5kb downstream 0.5kb downstream 1866 true SL2.50ch12: 692717-694582 Solanum lycopersicum
Solyc12g006140.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 692717-693216 Solanum lycopersicum
Solyc12g006140.1 1.0kb upstream 1.0kb upstream 2366 true SL2.50ch12: 693217-695582 Solanum lycopersicum
Solyc12g006140.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 694583-695582 Solanum lycopersicum
Solyc12g006140.1 1.0kb downstream 1.0kb downstream 2366 true SL2.50ch12: 692217-694582 Solanum lycopersicum
Solyc12g006140.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 692217-693216 Solanum lycopersicum
Solyc12g006140.1 2.0kb upstream 2.0kb upstream 3366 true SL2.50ch12: 693217-696582 Solanum lycopersicum
Solyc12g006140.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 694583-696582 Solanum lycopersicum
Solyc12g006140.1 2.0kb downstream 2.0kb downstream 3366 true SL2.50ch12: 691217-694582 Solanum lycopersicum
Solyc12g006140.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 691217-693216 Solanum lycopersicum
Solyc12g006140.1 5.0kb upstream 5.0kb upstream 6366 true SL2.50ch12: 693217-699582 Solanum lycopersicum
Solyc12g006140.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 694583-699582 Solanum lycopersicum
Solyc12g006140.1 5.0kb downstream 5.0kb downstream 6366 true SL2.50ch12: 688217-694582 Solanum lycopersicum
Solyc12g006140.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 688217-693216 Solanum lycopersicum
Solyc12g006140.1 10.0kb upstream 10.0kb upstream 11366 true SL2.50ch12: 693217-704582 Solanum lycopersicum
Solyc12g006140.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 694583-704582 Solanum lycopersicum
Solyc12g006140.1 10.0kb downstream 10.0kb downstream 11366 true SL2.50ch12: 683217-694582 Solanum lycopersicum
Solyc12g006140.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 683217-693216 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041019 5273 Angiosperm View MSA
121473987 5263 Asterids View MSA
123749191 5271 Pentapetalae View MSA
122791500 5272 Eudicot View MSA
121349648 5274 Embryophyte View MSA
123426313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain