Gene : Solyc04g082490.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K12385 - Niemann-Pick C1 protein (NPC1) Description:  Niemann-Pick C1 protein (AHRD V1 **-- C5FQM2_NANOT); contains Interpro domain(s) IPR004765 Niemann-Pick C type protein
Genomic Order:  2691 Name:  ? Solyc04g082490.2
Secondary Identifier:  ? PAC:36141799
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g082490.2 0.5kb upstream 0.5kb upstream 16959 true SL2.50ch04: 66124898-66141856 Solanum lycopersicum
Solyc04g082490.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 66141357-66141856 Solanum lycopersicum
Solyc04g082490.2 0.5kb downstream 0.5kb downstream 16959 true SL2.50ch04: 66124398-66141356 Solanum lycopersicum
Solyc04g082490.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 66124398-66124897 Solanum lycopersicum
Solyc04g082490.2 1.0kb upstream 1.0kb upstream 17459 true SL2.50ch04: 66124898-66142356 Solanum lycopersicum
Solyc04g082490.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 66141357-66142356 Solanum lycopersicum
Solyc04g082490.2 1.0kb downstream 1.0kb downstream 17459 true SL2.50ch04: 66123898-66141356 Solanum lycopersicum
Solyc04g082490.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 66123898-66124897 Solanum lycopersicum
Solyc04g082490.2 2.0kb upstream 2.0kb upstream 18459 true SL2.50ch04: 66124898-66143356 Solanum lycopersicum
Solyc04g082490.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 66141357-66143356 Solanum lycopersicum
Solyc04g082490.2 2.0kb downstream 2.0kb downstream 18459 true SL2.50ch04: 66122898-66141356 Solanum lycopersicum
Solyc04g082490.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 66122898-66124897 Solanum lycopersicum
Solyc04g082490.2 5.0kb upstream 5.0kb upstream 21459 true SL2.50ch04: 66124898-66146356 Solanum lycopersicum
Solyc04g082490.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 66141357-66146356 Solanum lycopersicum
Solyc04g082490.2 5.0kb downstream 5.0kb downstream 21459 true SL2.50ch04: 66119898-66141356 Solanum lycopersicum
Solyc04g082490.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 66119898-66124897 Solanum lycopersicum
Solyc04g082490.2 10.0kb upstream 10.0kb upstream 26459 true SL2.50ch04: 66124898-66151356 Solanum lycopersicum
Solyc04g082490.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 66141357-66151356 Solanum lycopersicum
Solyc04g082490.2 10.0kb downstream 10.0kb downstream 26459 true SL2.50ch04: 66114898-66141356 Solanum lycopersicum
Solyc04g082490.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 66114898-66124897 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470108 5263 Asterids View MSA
123738357 5271 Pentapetalae View MSA
122785760 5272 Eudicot View MSA
122045765 5273 Angiosperm View MSA
123429105 5275 Viridiplantae View MSA
121349896 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain