Gene : Solyc04g078480.2 S. lycopersicum ITAG2.4
Defline:  (1 of 6) PF11523 - Protein of unknown function (DUF3223) (DUF3223) Description:  DNA-directed RNA polymerase (Fragment) (AHRD V1 *-*- D7UBN7_VITVI)
Genomic Order:  2294 Name:  ? Solyc04g078480.2
Secondary Identifier:  ? PAC:36142524
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g078480.2 0.5kb upstream 0.5kb upstream 7074 true SL2.50ch04: 63212751-63219824 Solanum lycopersicum
Solyc04g078480.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 63219325-63219824 Solanum lycopersicum
Solyc04g078480.2 0.5kb downstream 0.5kb downstream 7074 true SL2.50ch04: 63212251-63219324 Solanum lycopersicum
Solyc04g078480.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 63212251-63212750 Solanum lycopersicum
Solyc04g078480.2 1.0kb upstream 1.0kb upstream 7574 true SL2.50ch04: 63212751-63220324 Solanum lycopersicum
Solyc04g078480.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 63219325-63220324 Solanum lycopersicum
Solyc04g078480.2 1.0kb downstream 1.0kb downstream 7574 true SL2.50ch04: 63211751-63219324 Solanum lycopersicum
Solyc04g078480.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 63211751-63212750 Solanum lycopersicum
Solyc04g078480.2 2.0kb upstream 2.0kb upstream 8574 true SL2.50ch04: 63212751-63221324 Solanum lycopersicum
Solyc04g078480.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 63219325-63221324 Solanum lycopersicum
Solyc04g078480.2 2.0kb downstream 2.0kb downstream 8574 true SL2.50ch04: 63210751-63219324 Solanum lycopersicum
Solyc04g078480.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 63210751-63212750 Solanum lycopersicum
Solyc04g078480.2 5.0kb upstream 5.0kb upstream 11574 true SL2.50ch04: 63212751-63224324 Solanum lycopersicum
Solyc04g078480.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 63219325-63224324 Solanum lycopersicum
Solyc04g078480.2 5.0kb downstream 5.0kb downstream 11574 true SL2.50ch04: 63207751-63219324 Solanum lycopersicum
Solyc04g078480.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 63207751-63212750 Solanum lycopersicum
Solyc04g078480.2 10.0kb upstream 10.0kb upstream 16574 true SL2.50ch04: 63212751-63229324 Solanum lycopersicum
Solyc04g078480.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 63219325-63229324 Solanum lycopersicum
Solyc04g078480.2 10.0kb downstream 10.0kb downstream 16574 true SL2.50ch04: 63202751-63219324 Solanum lycopersicum
Solyc04g078480.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 63202751-63212750 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467413 5263 Asterids View MSA
123737001 5271 Pentapetalae View MSA
122786246 5272 Eudicot View MSA
122047145 5273 Angiosperm View MSA
121351561 5274 Embryophyte View MSA
123426725 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain