Gene : Solyc04g078830.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K13174 - THO complex subunit 5 (THOC5) Description:  THO complex subunit 5 homolog (AHRD V1 *-*- THOC5_DANRE); contains Interpro domain(s) IPR019163 THO complex, subunit 5
Genomic Order:  2329 Name:  ? Solyc04g078830.2
Secondary Identifier:  ? PAC:36144085
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g078830.2 0.5kb upstream 0.5kb upstream 7456 true SL2.50ch04: 63492338-63499793 Solanum lycopersicum
Solyc04g078830.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 63492338-63492837 Solanum lycopersicum
Solyc04g078830.2 0.5kb downstream 0.5kb downstream 7456 true SL2.50ch04: 63492838-63500293 Solanum lycopersicum
Solyc04g078830.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 63499794-63500293 Solanum lycopersicum
Solyc04g078830.2 1.0kb upstream 1.0kb upstream 7956 true SL2.50ch04: 63491838-63499793 Solanum lycopersicum
Solyc04g078830.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 63491838-63492837 Solanum lycopersicum
Solyc04g078830.2 1.0kb downstream 1.0kb downstream 7956 true SL2.50ch04: 63492838-63500793 Solanum lycopersicum
Solyc04g078830.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 63499794-63500793 Solanum lycopersicum
Solyc04g078830.2 2.0kb upstream 2.0kb upstream 8956 true SL2.50ch04: 63490838-63499793 Solanum lycopersicum
Solyc04g078830.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 63490838-63492837 Solanum lycopersicum
Solyc04g078830.2 2.0kb downstream 2.0kb downstream 8956 true SL2.50ch04: 63492838-63501793 Solanum lycopersicum
Solyc04g078830.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 63499794-63501793 Solanum lycopersicum
Solyc04g078830.2 5.0kb upstream 5.0kb upstream 11956 true SL2.50ch04: 63487838-63499793 Solanum lycopersicum
Solyc04g078830.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 63487838-63492837 Solanum lycopersicum
Solyc04g078830.2 5.0kb downstream 5.0kb downstream 11956 true SL2.50ch04: 63492838-63504793 Solanum lycopersicum
Solyc04g078830.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 63499794-63504793 Solanum lycopersicum
Solyc04g078830.2 10.0kb upstream 10.0kb upstream 16956 true SL2.50ch04: 63482838-63499793 Solanum lycopersicum
Solyc04g078830.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 63482838-63492837 Solanum lycopersicum
Solyc04g078830.2 10.0kb downstream 10.0kb downstream 16956 true SL2.50ch04: 63492838-63509793 Solanum lycopersicum
Solyc04g078830.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 63499794-63509793 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467431 5263 Asterids View MSA
123737010 5271 Pentapetalae View MSA
122786339 5272 Eudicot View MSA
122045756 5273 Angiosperm View MSA
121346778 5274 Embryophyte View MSA
123425483 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain