Gene : Solyc08g005110.1 S. lycopersicum ITAG2.4
Defline:  (1 of 124) PTHR14155 - RING FINGER DOMAIN-CONTAINING Description:  Ring H2 finger protein (AHRD V1 *-*- D9ZHD8_HYPPE); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-type
Genomic Order:  12 Name:  ? Solyc08g005110.1
Secondary Identifier:  ? PAC:36150762
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g005110.1 0.5kb upstream 0.5kb upstream 1325 true SL2.50ch08: 73476-74800 Solanum lycopersicum
Solyc08g005110.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 74301-74800 Solanum lycopersicum
Solyc08g005110.1 0.5kb downstream 0.5kb downstream 1325 true SL2.50ch08: 72976-74300 Solanum lycopersicum
Solyc08g005110.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 72976-73475 Solanum lycopersicum
Solyc08g005110.1 1.0kb upstream 1.0kb upstream 1825 true SL2.50ch08: 73476-75300 Solanum lycopersicum
Solyc08g005110.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 74301-75300 Solanum lycopersicum
Solyc08g005110.1 1.0kb downstream 1.0kb downstream 1825 true SL2.50ch08: 72476-74300 Solanum lycopersicum
Solyc08g005110.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 72476-73475 Solanum lycopersicum
Solyc08g005110.1 2.0kb upstream 2.0kb upstream 2825 true SL2.50ch08: 73476-76300 Solanum lycopersicum
Solyc08g005110.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 74301-76300 Solanum lycopersicum
Solyc08g005110.1 2.0kb downstream 2.0kb downstream 2825 true SL2.50ch08: 71476-74300 Solanum lycopersicum
Solyc08g005110.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 71476-73475 Solanum lycopersicum
Solyc08g005110.1 5.0kb upstream 5.0kb upstream 5825 true SL2.50ch08: 73476-79300 Solanum lycopersicum
Solyc08g005110.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 74301-79300 Solanum lycopersicum
Solyc08g005110.1 5.0kb downstream 5.0kb downstream 5825 true SL2.50ch08: 68476-74300 Solanum lycopersicum
Solyc08g005110.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 68476-73475 Solanum lycopersicum
Solyc08g005110.1 10.0kb upstream 10.0kb upstream 10825 true SL2.50ch08: 73476-84300 Solanum lycopersicum
Solyc08g005110.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 74301-84300 Solanum lycopersicum
Solyc08g005110.1 10.0kb downstream 10.0kb downstream 10825 true SL2.50ch08: 63476-74300 Solanum lycopersicum
Solyc08g005110.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 63476-73475 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469427 5263 Asterids View MSA
123751014 5271 Pentapetalae View MSA
122788959 5272 Eudicot View MSA
122044567 5273 Angiosperm View MSA
121310312 5274 Embryophyte View MSA
123347829 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain