Gene : Solyc12g100220.1 S. lycopersicum ITAG2.4
Defline:  (1 of 46) KOG0725 - Reductases with broad range of substrate specificities Description:  Short-chain dehydrogenase/reductase SDR (AHRD V1 **-- B1M654_METRJ); contains Interpro domain(s) IPR002347 Glucose/ribitol dehydrogenase
Genomic Order:  2466 Name:  ? Solyc12g100220.1
Secondary Identifier:  ? PAC:36147851
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g100220.1 0.5kb upstream 0.5kb upstream 1470 true SL2.50ch12: 67021412-67022881 Solanum lycopersicum
Solyc12g100220.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 67021412-67021911 Solanum lycopersicum
Solyc12g100220.1 0.5kb downstream 0.5kb downstream 1470 true SL2.50ch12: 67021912-67023381 Solanum lycopersicum
Solyc12g100220.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 67022882-67023381 Solanum lycopersicum
Solyc12g100220.1 1.0kb upstream 1.0kb upstream 1970 true SL2.50ch12: 67020912-67022881 Solanum lycopersicum
Solyc12g100220.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 67020912-67021911 Solanum lycopersicum
Solyc12g100220.1 1.0kb downstream 1.0kb downstream 1970 true SL2.50ch12: 67021912-67023881 Solanum lycopersicum
Solyc12g100220.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 67022882-67023881 Solanum lycopersicum
Solyc12g100220.1 2.0kb upstream 2.0kb upstream 2970 true SL2.50ch12: 67019912-67022881 Solanum lycopersicum
Solyc12g100220.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 67019912-67021911 Solanum lycopersicum
Solyc12g100220.1 2.0kb downstream 2.0kb downstream 2970 true SL2.50ch12: 67021912-67024881 Solanum lycopersicum
Solyc12g100220.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 67022882-67024881 Solanum lycopersicum
Solyc12g100220.1 5.0kb upstream 5.0kb upstream 5970 true SL2.50ch12: 67016912-67022881 Solanum lycopersicum
Solyc12g100220.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 67016912-67021911 Solanum lycopersicum
Solyc12g100220.1 5.0kb downstream 5.0kb downstream 5970 true SL2.50ch12: 67021912-67027881 Solanum lycopersicum
Solyc12g100220.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 67022882-67027881 Solanum lycopersicum
Solyc12g100220.1 10.0kb upstream 10.0kb upstream 10970 true SL2.50ch12: 67011912-67022881 Solanum lycopersicum
Solyc12g100220.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 67011912-67021911 Solanum lycopersicum
Solyc12g100220.1 10.0kb downstream 10.0kb downstream 10970 true SL2.50ch12: 67021912-67032881 Solanum lycopersicum
Solyc12g100220.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 67022882-67032881 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477457 5263 Asterids View MSA
123751674 5271 Pentapetalae View MSA
122788273 5272 Eudicot View MSA
122044153 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121344803 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain