Gene : Solyc08g005230.2 S. lycopersicum ITAG2.4
Defline:  (1 of 3) PF07889 - Protein of unknown function (DUF1664) (DUF1664) Description:  BZIP transcription factor bZIP108 (Fragment) (AHRD V1 *--- Q0GPJ1_SOYBN); contains Interpro domain(s) IPR012458 Protein of unknown function DUF1664
Genomic Order:  24 Name:  ? Solyc08g005230.2
Secondary Identifier:  ? PAC:36150576
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g005230.2 0.5kb upstream 0.5kb upstream 6830 true SL2.50ch08: 143667-150496 Solanum lycopersicum
Solyc08g005230.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 143667-144166 Solanum lycopersicum
Solyc08g005230.2 0.5kb downstream 0.5kb downstream 6830 true SL2.50ch08: 144167-150996 Solanum lycopersicum
Solyc08g005230.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 150497-150996 Solanum lycopersicum
Solyc08g005230.2 1.0kb upstream 1.0kb upstream 7330 true SL2.50ch08: 143167-150496 Solanum lycopersicum
Solyc08g005230.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 143167-144166 Solanum lycopersicum
Solyc08g005230.2 1.0kb downstream 1.0kb downstream 7330 true SL2.50ch08: 144167-151496 Solanum lycopersicum
Solyc08g005230.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 150497-151496 Solanum lycopersicum
Solyc08g005230.2 2.0kb upstream 2.0kb upstream 8330 true SL2.50ch08: 142167-150496 Solanum lycopersicum
Solyc08g005230.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 142167-144166 Solanum lycopersicum
Solyc08g005230.2 2.0kb downstream 2.0kb downstream 8330 true SL2.50ch08: 144167-152496 Solanum lycopersicum
Solyc08g005230.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 150497-152496 Solanum lycopersicum
Solyc08g005230.2 5.0kb upstream 5.0kb upstream 11330 true SL2.50ch08: 139167-150496 Solanum lycopersicum
Solyc08g005230.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 139167-144166 Solanum lycopersicum
Solyc08g005230.2 5.0kb downstream 5.0kb downstream 11330 true SL2.50ch08: 144167-155496 Solanum lycopersicum
Solyc08g005230.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 150497-155496 Solanum lycopersicum
Solyc08g005230.2 10.0kb upstream 10.0kb upstream 16330 true SL2.50ch08: 134167-150496 Solanum lycopersicum
Solyc08g005230.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 134167-144166 Solanum lycopersicum
Solyc08g005230.2 10.0kb downstream 10.0kb downstream 16330 true SL2.50ch08: 144167-160496 Solanum lycopersicum
Solyc08g005230.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 150497-160496 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472401 5263 Asterids View MSA
123745740 5271 Pentapetalae View MSA
122789386 5272 Eudicot View MSA
122050291 5273 Angiosperm View MSA
121350785 5274 Embryophyte View MSA
123428058 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain