Gene : Solyc12g088720.1 S. lycopersicum ITAG2.4
Defline:  (1 of 6) K13126 - polyadenylate-binding protein (PABPC) Description:  Polyadenylate-binding protein 2 (AHRD V1 ***- B6U4M0_MAIZE); contains Interpro domain(s) IPR006515 Polyadenylate binding protein, human types 1, 2, 3, 4
Genomic Order:  2013 Name:  ? Solyc12g088720.1
Secondary Identifier:  ? PAC:36146852
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g088720.1 0.5kb upstream 0.5kb upstream 4354 true SL2.50ch12: 63976573-63980926 Solanum lycopersicum
Solyc12g088720.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 63976573-63977072 Solanum lycopersicum
Solyc12g088720.1 0.5kb downstream 0.5kb downstream 4354 true SL2.50ch12: 63977073-63981426 Solanum lycopersicum
Solyc12g088720.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 63980927-63981426 Solanum lycopersicum
Solyc12g088720.1 1.0kb upstream 1.0kb upstream 4854 true SL2.50ch12: 63976073-63980926 Solanum lycopersicum
Solyc12g088720.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 63976073-63977072 Solanum lycopersicum
Solyc12g088720.1 1.0kb downstream 1.0kb downstream 4854 true SL2.50ch12: 63977073-63981926 Solanum lycopersicum
Solyc12g088720.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 63980927-63981926 Solanum lycopersicum
Solyc12g088720.1 2.0kb upstream 2.0kb upstream 5854 true SL2.50ch12: 63975073-63980926 Solanum lycopersicum
Solyc12g088720.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 63975073-63977072 Solanum lycopersicum
Solyc12g088720.1 2.0kb downstream 2.0kb downstream 5854 true SL2.50ch12: 63977073-63982926 Solanum lycopersicum
Solyc12g088720.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 63980927-63982926 Solanum lycopersicum
Solyc12g088720.1 5.0kb upstream 5.0kb upstream 8854 true SL2.50ch12: 63972073-63980926 Solanum lycopersicum
Solyc12g088720.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 63972073-63977072 Solanum lycopersicum
Solyc12g088720.1 5.0kb downstream 5.0kb downstream 8854 true SL2.50ch12: 63977073-63985926 Solanum lycopersicum
Solyc12g088720.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 63980927-63985926 Solanum lycopersicum
Solyc12g088720.1 10.0kb upstream 10.0kb upstream 13854 true SL2.50ch12: 63967073-63980926 Solanum lycopersicum
Solyc12g088720.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 63967073-63977072 Solanum lycopersicum
Solyc12g088720.1 10.0kb downstream 10.0kb downstream 13854 true SL2.50ch12: 63977073-63990926 Solanum lycopersicum
Solyc12g088720.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 63980927-63990926 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475328 5263 Asterids View MSA
123741893 5271 Pentapetalae View MSA
122797353 5272 Eudicot View MSA
122046831 5273 Angiosperm View MSA
121349622 5274 Embryophyte View MSA
123428043 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain