Gene : Solyc12g095910.1 S. lycopersicum ITAG2.4
Defline:  (1 of 3) PTHR12000//PTHR12000:SF17 - HEMOGLOBINASE FAMILY MEMBER // SUBFAMILY NOT NAMED Description:  Vacuolar processing enzyme-3 (AHRD V1 **-- Q852T0_TOBAC); contains Interpro domain(s) IPR001096 Peptidase C13, legumain
Genomic Order:  2134 Name:  ? Solyc12g095910.1
Secondary Identifier:  ? PAC:36148373
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g095910.1 0.5kb upstream 0.5kb upstream 5550 true SL2.50ch12: 65012873-65018422 Solanum lycopersicum
Solyc12g095910.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 65012873-65013372 Solanum lycopersicum
Solyc12g095910.1 0.5kb downstream 0.5kb downstream 5550 true SL2.50ch12: 65013373-65018922 Solanum lycopersicum
Solyc12g095910.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 65018423-65018922 Solanum lycopersicum
Solyc12g095910.1 1.0kb upstream 1.0kb upstream 6050 true SL2.50ch12: 65012373-65018422 Solanum lycopersicum
Solyc12g095910.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 65012373-65013372 Solanum lycopersicum
Solyc12g095910.1 1.0kb downstream 1.0kb downstream 6050 true SL2.50ch12: 65013373-65019422 Solanum lycopersicum
Solyc12g095910.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 65018423-65019422 Solanum lycopersicum
Solyc12g095910.1 2.0kb upstream 2.0kb upstream 7050 true SL2.50ch12: 65011373-65018422 Solanum lycopersicum
Solyc12g095910.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 65011373-65013372 Solanum lycopersicum
Solyc12g095910.1 2.0kb downstream 2.0kb downstream 7050 true SL2.50ch12: 65013373-65020422 Solanum lycopersicum
Solyc12g095910.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 65018423-65020422 Solanum lycopersicum
Solyc12g095910.1 5.0kb upstream 5.0kb upstream 10050 true SL2.50ch12: 65008373-65018422 Solanum lycopersicum
Solyc12g095910.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 65008373-65013372 Solanum lycopersicum
Solyc12g095910.1 5.0kb downstream 5.0kb downstream 10050 true SL2.50ch12: 65013373-65023422 Solanum lycopersicum
Solyc12g095910.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 65018423-65023422 Solanum lycopersicum
Solyc12g095910.1 10.0kb upstream 10.0kb upstream 15050 true SL2.50ch12: 65003373-65018422 Solanum lycopersicum
Solyc12g095910.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 65003373-65013372 Solanum lycopersicum
Solyc12g095910.1 10.0kb downstream 10.0kb downstream 15050 true SL2.50ch12: 65013373-65028422 Solanum lycopersicum
Solyc12g095910.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 65018423-65028422 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476176 5263 Asterids View MSA
123743278 5271 Pentapetalae View MSA
122791730 5272 Eudicot View MSA
122046408 5273 Angiosperm View MSA
121350664 5274 Embryophyte View MSA
123428632 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain