Gene : Solyc12g096530.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR31235:SF9 - PEROXIDASE 18-RELATED Description:  Peroxidase (AHRD V1 ***- D7MRK0_ARALY); contains Interpro domain(s) IPR002016 Haem peroxidase, plant/fungal/bacterial
Genomic Order:  2196 Name:  ? Solyc12g096530.1
Secondary Identifier:  ? PAC:36148990
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-5466 Solanum lycopersicum pathologic  
Slycopersicum PWY-6824 Solanum lycopersicum pathologic  
Slycopersicum PWY-7214 Solanum lycopersicum pathologic  
Slycopersicum PWY-7445 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g096530.1 0.5kb upstream 0.5kb upstream 3965 true SL2.50ch12: 65410423-65414387 Solanum lycopersicum
Solyc12g096530.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 65413888-65414387 Solanum lycopersicum
Solyc12g096530.1 0.5kb downstream 0.5kb downstream 3965 true SL2.50ch12: 65409923-65413887 Solanum lycopersicum
Solyc12g096530.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 65409923-65410422 Solanum lycopersicum
Solyc12g096530.1 1.0kb upstream 1.0kb upstream 4465 true SL2.50ch12: 65410423-65414887 Solanum lycopersicum
Solyc12g096530.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 65413888-65414887 Solanum lycopersicum
Solyc12g096530.1 1.0kb downstream 1.0kb downstream 4465 true SL2.50ch12: 65409423-65413887 Solanum lycopersicum
Solyc12g096530.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 65409423-65410422 Solanum lycopersicum
Solyc12g096530.1 2.0kb upstream 2.0kb upstream 5465 true SL2.50ch12: 65410423-65415887 Solanum lycopersicum
Solyc12g096530.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 65413888-65415887 Solanum lycopersicum
Solyc12g096530.1 2.0kb downstream 2.0kb downstream 5465 true SL2.50ch12: 65408423-65413887 Solanum lycopersicum
Solyc12g096530.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 65408423-65410422 Solanum lycopersicum
Solyc12g096530.1 5.0kb upstream 5.0kb upstream 8465 true SL2.50ch12: 65410423-65418887 Solanum lycopersicum
Solyc12g096530.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 65413888-65418887 Solanum lycopersicum
Solyc12g096530.1 5.0kb downstream 5.0kb downstream 8465 true SL2.50ch12: 65405423-65413887 Solanum lycopersicum
Solyc12g096530.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 65405423-65410422 Solanum lycopersicum
Solyc12g096530.1 10.0kb upstream 10.0kb upstream 13465 true SL2.50ch12: 65410423-65423887 Solanum lycopersicum
Solyc12g096530.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 65413888-65423887 Solanum lycopersicum
Solyc12g096530.1 10.0kb downstream 10.0kb downstream 13465 true SL2.50ch12: 65400423-65413887 Solanum lycopersicum
Solyc12g096530.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 65400423-65410422 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040962 5273 Angiosperm View MSA
121414139 5263 Asterids View MSA
123737779 5271 Pentapetalae View MSA
122790271 5272 Eudicot View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain