Gene : Solyc12g055750.1 S. lycopersicum ITAG2.4
Defline:  (1 of 6) K07300 - Ca2+:H+ antiporter (chaA, CAX) Description:  Vacuolar cation/proton exchanger 2 (AHRD V1 ***- B6UEI1_MAIZE); contains Interpro domain(s) IPR004713 Calcium/proton exchanger
Genomic Order:  1778 Name:  ? Solyc12g055750.1
Secondary Identifier:  ? PAC:36148967
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g055750.1 0.5kb upstream 0.5kb upstream 7945 true SL2.50ch12: 61735489-61743433 Solanum lycopersicum
Solyc12g055750.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 61742934-61743433 Solanum lycopersicum
Solyc12g055750.1 0.5kb downstream 0.5kb downstream 7945 true SL2.50ch12: 61734989-61742933 Solanum lycopersicum
Solyc12g055750.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 61734989-61735488 Solanum lycopersicum
Solyc12g055750.1 1.0kb upstream 1.0kb upstream 8445 true SL2.50ch12: 61735489-61743933 Solanum lycopersicum
Solyc12g055750.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 61742934-61743933 Solanum lycopersicum
Solyc12g055750.1 1.0kb downstream 1.0kb downstream 8445 true SL2.50ch12: 61734489-61742933 Solanum lycopersicum
Solyc12g055750.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 61734489-61735488 Solanum lycopersicum
Solyc12g055750.1 2.0kb upstream 2.0kb upstream 9445 true SL2.50ch12: 61735489-61744933 Solanum lycopersicum
Solyc12g055750.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 61742934-61744933 Solanum lycopersicum
Solyc12g055750.1 2.0kb downstream 2.0kb downstream 9445 true SL2.50ch12: 61733489-61742933 Solanum lycopersicum
Solyc12g055750.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 61733489-61735488 Solanum lycopersicum
Solyc12g055750.1 5.0kb upstream 5.0kb upstream 12445 true SL2.50ch12: 61735489-61747933 Solanum lycopersicum
Solyc12g055750.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 61742934-61747933 Solanum lycopersicum
Solyc12g055750.1 5.0kb downstream 5.0kb downstream 12445 true SL2.50ch12: 61730489-61742933 Solanum lycopersicum
Solyc12g055750.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 61730489-61735488 Solanum lycopersicum
Solyc12g055750.1 10.0kb upstream 10.0kb upstream 17445 true SL2.50ch12: 61735489-61752933 Solanum lycopersicum
Solyc12g055750.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 61742934-61752933 Solanum lycopersicum
Solyc12g055750.1 10.0kb downstream 10.0kb downstream 17445 true SL2.50ch12: 61725489-61742933 Solanum lycopersicum
Solyc12g055750.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 61725489-61735488 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475413 5263 Asterids View MSA
123747660 5271 Pentapetalae View MSA
122792881 5272 Eudicot View MSA
122045212 5273 Angiosperm View MSA
121347037 5274 Embryophyte View MSA
123427763 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain