Gene : Solyc12g042910.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K02295 - cryptochrome (CRY) Description:  Cryptochrome-like protein 1 (AHRD V1 ***- Q5IFN1_OSTTA); contains Interpro domain(s) IPR005101 DNA photolyase, FAD-binding/Cryptochrome, C-terminal
Genomic Order:  1299 Name:  ? Solyc12g042910.1
Secondary Identifier:  ? PAC:36146990
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g042910.1 0.5kb upstream 0.5kb upstream 5751 true SL2.50ch12: 39514857-39520607 Solanum lycopersicum
Solyc12g042910.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 39514857-39515356 Solanum lycopersicum
Solyc12g042910.1 0.5kb downstream 0.5kb downstream 5751 true SL2.50ch12: 39515357-39521107 Solanum lycopersicum
Solyc12g042910.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 39520608-39521107 Solanum lycopersicum
Solyc12g042910.1 1.0kb upstream 1.0kb upstream 6251 true SL2.50ch12: 39514357-39520607 Solanum lycopersicum
Solyc12g042910.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 39514357-39515356 Solanum lycopersicum
Solyc12g042910.1 1.0kb downstream 1.0kb downstream 6251 true SL2.50ch12: 39515357-39521607 Solanum lycopersicum
Solyc12g042910.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 39520608-39521607 Solanum lycopersicum
Solyc12g042910.1 2.0kb upstream 2.0kb upstream 7251 true SL2.50ch12: 39513357-39520607 Solanum lycopersicum
Solyc12g042910.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 39513357-39515356 Solanum lycopersicum
Solyc12g042910.1 2.0kb downstream 2.0kb downstream 7251 true SL2.50ch12: 39515357-39522607 Solanum lycopersicum
Solyc12g042910.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 39520608-39522607 Solanum lycopersicum
Solyc12g042910.1 5.0kb upstream 5.0kb upstream 10251 true SL2.50ch12: 39510357-39520607 Solanum lycopersicum
Solyc12g042910.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 39510357-39515356 Solanum lycopersicum
Solyc12g042910.1 5.0kb downstream 5.0kb downstream 10251 true SL2.50ch12: 39515357-39525607 Solanum lycopersicum
Solyc12g042910.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 39520608-39525607 Solanum lycopersicum
Solyc12g042910.1 10.0kb upstream 10.0kb upstream 15251 true SL2.50ch12: 39505357-39520607 Solanum lycopersicum
Solyc12g042910.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 39505357-39515356 Solanum lycopersicum
Solyc12g042910.1 10.0kb downstream 10.0kb downstream 15251 true SL2.50ch12: 39515357-39530607 Solanum lycopersicum
Solyc12g042910.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 39520608-39530607 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468532 5263 Asterids View MSA
123737581 5271 Pentapetalae View MSA
122791265 5272 Eudicot View MSA
122046460 5273 Angiosperm View MSA
121346822 5274 Embryophyte View MSA
123428792 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain