Gene : Solyc12g070270.1 S. lycopersicum ITAG2.4
Defline:  (1 of 9) 3.6.3.43 - Peptide-transporting ATPase Description:  Lipid A export ATP-binding/permease protein msbA (AHRD V1 *--- MSBA_CHRVO); contains Interpro domain(s) IPR001140 ABC transporter, transmembrane region
Genomic Order:  1045 Name:  ? Solyc12g070270.1
Secondary Identifier:  ? PAC:36147222
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g070270.1 0.5kb upstream 0.5kb upstream 17412 true SL2.50ch12: 29962859-29980270 Solanum lycopersicum
Solyc12g070270.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 29962859-29963358 Solanum lycopersicum
Solyc12g070270.1 0.5kb downstream 0.5kb downstream 17412 true SL2.50ch12: 29963359-29980770 Solanum lycopersicum
Solyc12g070270.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 29980271-29980770 Solanum lycopersicum
Solyc12g070270.1 1.0kb upstream 1.0kb upstream 17912 true SL2.50ch12: 29962359-29980270 Solanum lycopersicum
Solyc12g070270.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 29962359-29963358 Solanum lycopersicum
Solyc12g070270.1 1.0kb downstream 1.0kb downstream 17912 true SL2.50ch12: 29963359-29981270 Solanum lycopersicum
Solyc12g070270.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 29980271-29981270 Solanum lycopersicum
Solyc12g070270.1 2.0kb upstream 2.0kb upstream 18912 true SL2.50ch12: 29961359-29980270 Solanum lycopersicum
Solyc12g070270.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 29961359-29963358 Solanum lycopersicum
Solyc12g070270.1 2.0kb downstream 2.0kb downstream 18912 true SL2.50ch12: 29963359-29982270 Solanum lycopersicum
Solyc12g070270.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 29980271-29982270 Solanum lycopersicum
Solyc12g070270.1 5.0kb upstream 5.0kb upstream 21912 true SL2.50ch12: 29958359-29980270 Solanum lycopersicum
Solyc12g070270.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 29958359-29963358 Solanum lycopersicum
Solyc12g070270.1 5.0kb downstream 5.0kb downstream 21912 true SL2.50ch12: 29963359-29985270 Solanum lycopersicum
Solyc12g070270.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 29980271-29985270 Solanum lycopersicum
Solyc12g070270.1 10.0kb upstream 10.0kb upstream 26912 true SL2.50ch12: 29953359-29980270 Solanum lycopersicum
Solyc12g070270.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 29953359-29963358 Solanum lycopersicum
Solyc12g070270.1 10.0kb downstream 10.0kb downstream 26912 true SL2.50ch12: 29963359-29990270 Solanum lycopersicum
Solyc12g070270.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 29980271-29990270 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479158 5263 Asterids View MSA
123743062 5271 Pentapetalae View MSA
122793644 5272 Eudicot View MSA
122046260 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121346944 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain