Gene : Solyc12g056900.1 S. lycopersicum ITAG2.4
Defline:  (1 of 5) PTHR13169 - UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN Description:  Membrane-anchored ubiquitin-fold protein 2 (AHRD V1 ***- D7M7C8_ARALY); contains Interpro domain(s) IPR017000 Membrane-anchored ubiquitin-fold protein, HCG-1
Genomic Order:  1893 Name:  ? Solyc12g056900.1
Secondary Identifier:  ? PAC:36146942
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g056900.1 0.5kb upstream 0.5kb upstream 4646 true SL2.50ch12: 62962609-62967254 Solanum lycopersicum
Solyc12g056900.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 62966755-62967254 Solanum lycopersicum
Solyc12g056900.1 0.5kb downstream 0.5kb downstream 4646 true SL2.50ch12: 62962109-62966754 Solanum lycopersicum
Solyc12g056900.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 62962109-62962608 Solanum lycopersicum
Solyc12g056900.1 1.0kb upstream 1.0kb upstream 5146 true SL2.50ch12: 62962609-62967754 Solanum lycopersicum
Solyc12g056900.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 62966755-62967754 Solanum lycopersicum
Solyc12g056900.1 1.0kb downstream 1.0kb downstream 5146 true SL2.50ch12: 62961609-62966754 Solanum lycopersicum
Solyc12g056900.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 62961609-62962608 Solanum lycopersicum
Solyc12g056900.1 2.0kb upstream 2.0kb upstream 6146 true SL2.50ch12: 62962609-62968754 Solanum lycopersicum
Solyc12g056900.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 62966755-62968754 Solanum lycopersicum
Solyc12g056900.1 2.0kb downstream 2.0kb downstream 6146 true SL2.50ch12: 62960609-62966754 Solanum lycopersicum
Solyc12g056900.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 62960609-62962608 Solanum lycopersicum
Solyc12g056900.1 5.0kb upstream 5.0kb upstream 9146 true SL2.50ch12: 62962609-62971754 Solanum lycopersicum
Solyc12g056900.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 62966755-62971754 Solanum lycopersicum
Solyc12g056900.1 5.0kb downstream 5.0kb downstream 9146 true SL2.50ch12: 62957609-62966754 Solanum lycopersicum
Solyc12g056900.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 62957609-62962608 Solanum lycopersicum
Solyc12g056900.1 10.0kb upstream 10.0kb upstream 14146 true SL2.50ch12: 62962609-62976754 Solanum lycopersicum
Solyc12g056900.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 62966755-62976754 Solanum lycopersicum
Solyc12g056900.1 10.0kb downstream 10.0kb downstream 14146 true SL2.50ch12: 62952609-62966754 Solanum lycopersicum
Solyc12g056900.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 62952609-62962608 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481736 5263 Asterids View MSA
123744059 5271 Pentapetalae View MSA
122795764 5272 Eudicot View MSA
122050739 5273 Angiosperm View MSA
121344338 5274 Embryophyte View MSA
123427741 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain