Gene : Solyc12g042360.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR11062:SF81 - BETA-1,4-XYLOSYLTRANSFERASE IRX10L-RELATED Description:  Exostosin-like glycosyltransferase (AHRD V1 **-- A8I7L6_CHLRE); contains Interpro domain(s) IPR004263 Exostosin-like
Genomic Order:  1351 Name:  ? Solyc12g042360.1
Secondary Identifier:  ? PAC:36146684
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-5980 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g042360.1 0.5kb upstream 0.5kb upstream 6040 true SL2.50ch12: 40337966-40344005 Solanum lycopersicum
Solyc12g042360.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 40343506-40344005 Solanum lycopersicum
Solyc12g042360.1 0.5kb downstream 0.5kb downstream 6040 true SL2.50ch12: 40337466-40343505 Solanum lycopersicum
Solyc12g042360.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 40337466-40337965 Solanum lycopersicum
Solyc12g042360.1 1.0kb upstream 1.0kb upstream 6540 true SL2.50ch12: 40337966-40344505 Solanum lycopersicum
Solyc12g042360.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 40343506-40344505 Solanum lycopersicum
Solyc12g042360.1 1.0kb downstream 1.0kb downstream 6540 true SL2.50ch12: 40336966-40343505 Solanum lycopersicum
Solyc12g042360.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 40336966-40337965 Solanum lycopersicum
Solyc12g042360.1 2.0kb upstream 2.0kb upstream 7540 true SL2.50ch12: 40337966-40345505 Solanum lycopersicum
Solyc12g042360.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 40343506-40345505 Solanum lycopersicum
Solyc12g042360.1 2.0kb downstream 2.0kb downstream 7540 true SL2.50ch12: 40335966-40343505 Solanum lycopersicum
Solyc12g042360.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 40335966-40337965 Solanum lycopersicum
Solyc12g042360.1 5.0kb upstream 5.0kb upstream 10540 true SL2.50ch12: 40337966-40348505 Solanum lycopersicum
Solyc12g042360.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 40343506-40348505 Solanum lycopersicum
Solyc12g042360.1 5.0kb downstream 5.0kb downstream 10540 true SL2.50ch12: 40332966-40343505 Solanum lycopersicum
Solyc12g042360.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 40332966-40337965 Solanum lycopersicum
Solyc12g042360.1 10.0kb upstream 10.0kb upstream 15540 true SL2.50ch12: 40337966-40353505 Solanum lycopersicum
Solyc12g042360.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 40343506-40353505 Solanum lycopersicum
Solyc12g042360.1 10.0kb downstream 10.0kb downstream 15540 true SL2.50ch12: 40327966-40343505 Solanum lycopersicum
Solyc12g042360.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 40327966-40337965 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121784777 5273 Angiosperm View MSA
121371765 5263 Asterids Singleton cluster - no MSA
123756904 5271 Pentapetalae View MSA
122778003 5272 Eudicot View MSA
121056184 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain