Gene : Solyc12g038370.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K03111 - single-strand DNA-binding protein (ssb) Description:  Single-stranded DNA-binding protein (AHRD V1 ***- B6U5B2_MAIZE); contains Interpro domain(s) IPR012340 Nucleic acid-binding, OB-fold
Genomic Order:  1544 Name:  ? Solyc12g038370.1
Secondary Identifier:  ? PAC:36147784
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g038370.1 0.5kb upstream 0.5kb upstream 5826 true SL2.50ch12: 48168358-48174183 Solanum lycopersicum
Solyc12g038370.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 48173684-48174183 Solanum lycopersicum
Solyc12g038370.1 0.5kb downstream 0.5kb downstream 5826 true SL2.50ch12: 48167858-48173683 Solanum lycopersicum
Solyc12g038370.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 48167858-48168357 Solanum lycopersicum
Solyc12g038370.1 1.0kb upstream 1.0kb upstream 6326 true SL2.50ch12: 48168358-48174683 Solanum lycopersicum
Solyc12g038370.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 48173684-48174683 Solanum lycopersicum
Solyc12g038370.1 1.0kb downstream 1.0kb downstream 6326 true SL2.50ch12: 48167358-48173683 Solanum lycopersicum
Solyc12g038370.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 48167358-48168357 Solanum lycopersicum
Solyc12g038370.1 2.0kb upstream 2.0kb upstream 7326 true SL2.50ch12: 48168358-48175683 Solanum lycopersicum
Solyc12g038370.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 48173684-48175683 Solanum lycopersicum
Solyc12g038370.1 2.0kb downstream 2.0kb downstream 7326 true SL2.50ch12: 48166358-48173683 Solanum lycopersicum
Solyc12g038370.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 48166358-48168357 Solanum lycopersicum
Solyc12g038370.1 5.0kb upstream 5.0kb upstream 10326 true SL2.50ch12: 48168358-48178683 Solanum lycopersicum
Solyc12g038370.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 48173684-48178683 Solanum lycopersicum
Solyc12g038370.1 5.0kb downstream 5.0kb downstream 10326 true SL2.50ch12: 48163358-48173683 Solanum lycopersicum
Solyc12g038370.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 48163358-48168357 Solanum lycopersicum
Solyc12g038370.1 10.0kb upstream 10.0kb upstream 15326 true SL2.50ch12: 48168358-48183683 Solanum lycopersicum
Solyc12g038370.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 48173684-48183683 Solanum lycopersicum
Solyc12g038370.1 10.0kb downstream 10.0kb downstream 15326 true SL2.50ch12: 48158358-48173683 Solanum lycopersicum
Solyc12g038370.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 48158358-48168357 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471402 5263 Asterids View MSA
123739023 5271 Pentapetalae View MSA
122787839 5272 Eudicot View MSA
122045301 5273 Angiosperm View MSA
121349645 5274 Embryophyte View MSA
123381385 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain