Gene : Solyc08g074740.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR10459//PTHR10459:SF64 - DNA LIGASE // SUBFAMILY NOT NAMED Description:  Novel protein similar to vertebrate ADP-ribosyltransferase (NAD+ poly (ADP-ribose) polymerase) (ADPRT) (AHRD V1 **** Q5RHR0_DANRE); contains Interpro domain(s) IPR012317 Poly(ADP-ribose) polymerase, catalytic region
Genomic Order:  1609 Name:  ? Solyc08g074740.2
Secondary Identifier:  ? PAC:36150973
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g074740.2 0.5kb upstream 0.5kb upstream 8987 true SL2.50ch08: 58876682-58885668 Solanum lycopersicum
Solyc08g074740.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 58885169-58885668 Solanum lycopersicum
Solyc08g074740.2 0.5kb downstream 0.5kb downstream 8987 true SL2.50ch08: 58876182-58885168 Solanum lycopersicum
Solyc08g074740.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 58876182-58876681 Solanum lycopersicum
Solyc08g074740.2 1.0kb upstream 1.0kb upstream 9487 true SL2.50ch08: 58876682-58886168 Solanum lycopersicum
Solyc08g074740.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 58885169-58886168 Solanum lycopersicum
Solyc08g074740.2 1.0kb downstream 1.0kb downstream 9487 true SL2.50ch08: 58875682-58885168 Solanum lycopersicum
Solyc08g074740.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 58875682-58876681 Solanum lycopersicum
Solyc08g074740.2 2.0kb upstream 2.0kb upstream 10487 true SL2.50ch08: 58876682-58887168 Solanum lycopersicum
Solyc08g074740.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 58885169-58887168 Solanum lycopersicum
Solyc08g074740.2 2.0kb downstream 2.0kb downstream 10487 true SL2.50ch08: 58874682-58885168 Solanum lycopersicum
Solyc08g074740.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 58874682-58876681 Solanum lycopersicum
Solyc08g074740.2 5.0kb upstream 5.0kb upstream 13487 true SL2.50ch08: 58876682-58890168 Solanum lycopersicum
Solyc08g074740.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 58885169-58890168 Solanum lycopersicum
Solyc08g074740.2 5.0kb downstream 5.0kb downstream 13487 true SL2.50ch08: 58871682-58885168 Solanum lycopersicum
Solyc08g074740.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 58871682-58876681 Solanum lycopersicum
Solyc08g074740.2 10.0kb upstream 10.0kb upstream 18487 true SL2.50ch08: 58876682-58895168 Solanum lycopersicum
Solyc08g074740.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 58885169-58895168 Solanum lycopersicum
Solyc08g074740.2 10.0kb downstream 10.0kb downstream 18487 true SL2.50ch08: 58866682-58885168 Solanum lycopersicum
Solyc08g074740.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 58866682-58876681 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472296 5263 Asterids View MSA
123750076 5271 Pentapetalae View MSA
122797319 5272 Eudicot View MSA
122051365 5273 Angiosperm View MSA
121345540 5274 Embryophyte View MSA
123380235 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain