Gene : Solyc08g062560.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K15264 - putative methyltransferase [EC:2.1.1.-] (NSUN5, WBSCR20) Description:  Ribosomal RNA small subunit methyltransferase B (AHRD V1 *-** B5YF43_DICT6); contains Interpro domain(s) IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p
Genomic Order:  1107 Name:  ? Solyc08g062560.2
Secondary Identifier:  ? PAC:36151524
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g062560.2 0.5kb upstream 0.5kb upstream 10868 true SL2.50ch08: 51388569-51399436 Solanum lycopersicum
Solyc08g062560.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 51398937-51399436 Solanum lycopersicum
Solyc08g062560.2 0.5kb downstream 0.5kb downstream 10868 true SL2.50ch08: 51388069-51398936 Solanum lycopersicum
Solyc08g062560.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 51388069-51388568 Solanum lycopersicum
Solyc08g062560.2 1.0kb upstream 1.0kb upstream 11368 true SL2.50ch08: 51388569-51399936 Solanum lycopersicum
Solyc08g062560.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 51398937-51399936 Solanum lycopersicum
Solyc08g062560.2 1.0kb downstream 1.0kb downstream 11368 true SL2.50ch08: 51387569-51398936 Solanum lycopersicum
Solyc08g062560.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 51387569-51388568 Solanum lycopersicum
Solyc08g062560.2 2.0kb upstream 2.0kb upstream 12368 true SL2.50ch08: 51388569-51400936 Solanum lycopersicum
Solyc08g062560.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 51398937-51400936 Solanum lycopersicum
Solyc08g062560.2 2.0kb downstream 2.0kb downstream 12368 true SL2.50ch08: 51386569-51398936 Solanum lycopersicum
Solyc08g062560.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 51386569-51388568 Solanum lycopersicum
Solyc08g062560.2 5.0kb upstream 5.0kb upstream 15368 true SL2.50ch08: 51388569-51403936 Solanum lycopersicum
Solyc08g062560.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 51398937-51403936 Solanum lycopersicum
Solyc08g062560.2 5.0kb downstream 5.0kb downstream 15368 true SL2.50ch08: 51383569-51398936 Solanum lycopersicum
Solyc08g062560.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 51383569-51388568 Solanum lycopersicum
Solyc08g062560.2 10.0kb upstream 10.0kb upstream 20368 true SL2.50ch08: 51388569-51408936 Solanum lycopersicum
Solyc08g062560.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 51398937-51408936 Solanum lycopersicum
Solyc08g062560.2 10.0kb downstream 10.0kb downstream 20368 true SL2.50ch08: 51378569-51398936 Solanum lycopersicum
Solyc08g062560.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 51378569-51388568 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476158 5263 Asterids View MSA
123738087 5271 Pentapetalae View MSA
122791189 5272 Eudicot View MSA
122043756 5273 Angiosperm View MSA
121346877 5274 Embryophyte View MSA
123427921 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain